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SCNpilot_cont_300_bf_scaffold_1231

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1231_1
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..2682)
DNA (2682bp) protein (894aa)
Uncharacterized protein (Fragment) n=2 Tax=Sphingobium RepID=T0I012_9SPHN rbh
Histidine kinase {ECO:0000313|EMBL:AJR23448.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
putative outer membrane autotransporter rbh
SCNpilot_cont_300_bf_scaffold_1231_2
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2679..4472)
DNA (1794bp) protein (598aa)
hemin transporter n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A672CA rbh
Hemin transporter {ECO:0000313|EMBL:AJR23449.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;
Polypeptide-transport-associated domain-containing protein ShlB-type rbh
SCNpilot_cont_300_bf_scaffold_1231_3
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4658..5395)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z845_SPHJU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KER37943.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium luc
SCNpilot_cont_300_bf_scaffold_1231_4
unknown

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comp(5382..5471)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1231_5
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5468..7351)
DNA (1884bp) protein (628aa)
Putative adenylate cyclase n=1 Tax=Sphingobium indicum B90A RepID=I5BD42_9SPHN rbh
adenylate/guanylate cyclase with Chase sensor rbh
Putative adenylate cyclase {ECO:0000313|EMBL:EIM67494.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium i
SCNpilot_cont_300_bf_scaffold_1231_6
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7358..10483)
DNA (3126bp) protein (1042aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5BD43_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM67495.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indi
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_1231_7
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11044..11403
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B7A1DF
Uncharacterized protein {ECO:0000313|EMBL:AJR26801.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1231_8
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11492..12733
DNA (1242bp) protein (414aa)
transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B587
Transporter {ECO:0000313|EMBL:AJR25300.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
outer membrane efflux protein
SCNpilot_cont_300_bf_scaffold_1231_9
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12730..14187
DNA (1458bp) protein (486aa)
RND transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B588
RND transporter {ECO:0000313|EMBL:AJR25299.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hlyD; secretion protein HlyD
SCNpilot_cont_300_bf_scaffold_1231_10
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14184..17324
DNA (3141bp) protein (1047aa)
cation transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B589
Cation transporter {ECO:0000313|EMBL:AJR25298.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.
heavy metal efflux pump CzcA
SCNpilot_cont_300_bf_scaffold_1231_11
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17321..17692
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ15_SPHAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF54257.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sour
SCNpilot_cont_300_bf_scaffold_1231_12
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17741..19993)
DNA (2253bp) protein (751aa)
folate hydrolase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287D2F1 rbh
Peptidase M26 family protein {ECO:0000313|EMBL:GAO38905.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
folate hydrolase
SCNpilot_cont_300_bf_scaffold_1231_13
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20247..20627)
DNA (381bp) protein (127aa)
Galactoside O-acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6S7_9GAMM
hexapeptide repeat of succinyl-transferase family protein
Hexapeptide repeat of succinyl-transferase family protein {ECO:0000313|EMBL:AJZ63045.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkhold
SCNpilot_cont_300_bf_scaffold_1231_14
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21035..22285
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z047_SPHJU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAI95979.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japo
SCNpilot_cont_300_bf_scaffold_1231_15
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22282..22581
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A3652B
Uncharacterized protein {ECO:0000313|EMBL:GAO37968.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
Displaying 15 items

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