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SCNpilot_cont_300_bf_scaffold_1247

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1247_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1947)
DNA (1947bp) protein (649aa)
preprotein translocase subunit SecA n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4738F
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
preprotein translocase subunit SecA
SCNpilot_cont_300_bf_scaffold_1247_2
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2056..2310)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KHA65060.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_cont_300_bf_scaffold_1247_3
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2375..2659)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C325E
Uncharacterized protein {ECO:0000313|EMBL:GAM00787.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
energy transducer TonB
SCNpilot_cont_300_bf_scaffold_1247_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2974..4167
DNA (1194bp) protein (398aa)
N-acetylglutamate synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DF58BD
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomon
arginine biosynthesis protein ArgJ
SCNpilot_cont_300_bf_scaffold_1247_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4169..4777
DNA (609bp) protein (203aa)
Glutathione S-transferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4L8_9SPHN
glutathione S-transferase Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
glutathione S-transferase
SCNpilot_cont_300_bf_scaffold_1247_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4852..8625)
DNA (3774bp) protein (1258aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
DNA helicase UvrD n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5F020
DNA helicase UvrD
SCNpilot_cont_300_bf_scaffold_1247_7
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8609..11560)
DNA (2952bp) protein (984aa)
helicase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3FEAB rbh
Double-strand break repair protein AddB {ECO:0000313|EMBL:EZP56963.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
helicase
SCNpilot_cont_300_bf_scaffold_1247_8
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11696..12436)
DNA (741bp) protein (247aa)
mannose-1-phosphate guanylyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB4FA rbh
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KHA65057.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
mannose-1-phosphate guanylyltransferase
SCNpilot_cont_300_bf_scaffold_1247_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12448..13428)
DNA (981bp) protein (327aa)
Phosphotransferase enzyme family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WUH5_9SPHN rbh
DNA, contig: SP649 {ECO:0000313|EMBL:GAN14988.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
aminoglycoside phosphotransferase rbh
SCNpilot_cont_300_bf_scaffold_1247_10
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13413..13859)
DNA (447bp) protein (149aa)
ATPase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB4FC
ATPase {ECO:0000313|EMBL:KHA65104.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
ATPase
SCNpilot_cont_300_bf_scaffold_1247_11
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13856..14179)
DNA (324bp) protein (108aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
His Kinase A domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WUH7_9SPHN
histidine kinase
SCNpilot_cont_300_bf_scaffold_1247_12
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

14393..15367
DNA (975bp) protein (325aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY09879.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
SCNpilot_cont_300_bf_scaffold_1247_13
unknown

Not on your lists

15410..16246
DNA (837bp) protein (279aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1247_14
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16221..17639)
DNA (1419bp) protein (473aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000360C5CE
SCNpilot_cont_300_bf_scaffold_1247_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17918..19924
DNA (2007bp) protein (669aa)
Sensory box/GGDEF family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGQ4_9RHIZ
Sensory box/GGDEF family protein {ECO:0000313|EMBL:EHH08434.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
signalling protein N terminal repeat/GGDEF/EAL domain-containing protein
SCNpilot_cont_300_bf_scaffold_1247_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20071..20634)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031DC2F5
hypothetical protein
UPF0301 protein TS85_06365 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
SCNpilot_cont_300_bf_scaffold_1247_17
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20741..21220
DNA (480bp) protein (160aa)
peroxiredoxin n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000361E91D
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ABF51890.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
SCNpilot_cont_300_bf_scaffold_1247_18
unknown

Not on your lists

21269..21478
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1247_19
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21647..23077
DNA (1431bp) protein (477aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B2F924
SCNpilot_cont_300_bf_scaffold_1247_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23137..23655
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036738AB
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29465.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1247_21
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23700..24455)
DNA (756bp) protein (252aa)
hydrolase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B435A7
Uncharacterized protein {ECO:0000313|EMBL:GAL99586.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
hydrolase
SCNpilot_cont_300_bf_scaffold_1247_22
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24442..24885)
DNA (444bp) protein (148aa)
aldehyde-activating protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003047FF4
glutathione-dependent formaldehyde-activating protein
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:ABQ69021.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas
SCNpilot_cont_300_bf_scaffold_1247_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24998..25441
DNA (444bp) protein (148aa)
transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB0A5
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJP71939.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
SCNpilot_cont_300_bf_scaffold_1247_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25434..26534
DNA (1101bp) protein (367aa)
secretion protein HlyD n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB7D
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AJP71940.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_cont_300_bf_scaffold_1247_25
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26534..28105
DNA (1572bp) protein (524aa)
Drug resistance transporter EmrB/QacA subfamily n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRD0_SPHAL rbh
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAO38620.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomona
DSBA oxidoreductase
SCNpilot_cont_300_bf_scaffold_1247_26

Not on your lists

comp(28228..28665)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000381B0EB
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000313|EMBL:AIA10448.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
aldehyde-activating protein
SCNpilot_cont_300_bf_scaffold_1247_27
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28662..29690)
DNA (1029bp) protein (343aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Sphingomonas sp. S17 RepID=F3WUI9_9SPHN rbh
SCNpilot_cont_300_bf_scaffold_1247_28
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29753..30469)
DNA (717bp) protein (239aa)
methyltransferase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD71E
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AIT05832.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_1247_29
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30479..32701)
DNA (2223bp) protein (741aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035EF9AD
DNA, contig: SP650 {ECO:0000313|EMBL:GAN15003.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
peptidase S9 rbh
SCNpilot_cont_300_bf_scaffold_1247_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(32921..33307)
DNA (387bp) protein (129aa)
50S ribosomal protein L19 n=1 Tax=Sphingomonas melonis RepID=UPI00037C1BA9
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
Displaying items 1-30 of 51 in total

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