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SCNpilot_cont_300_bf_scaffold_1337

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1337_1
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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237..1085
DNA (849bp) protein (283aa)
N-carbamoylputrescine amidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031B440A rbh
N-carbamoylputrescine amidase {ECO:0000313|EMBL:GAM02455.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
N-carbamoylputrescine amidase
SCNpilot_cont_300_bf_scaffold_1337_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1306..2001
DNA (696bp) protein (232aa)
chemotaxis protein CheY n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B59E2C
Sphingomonas taxi strain 30a NODE_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27154.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
chemotaxis protein CheY
SCNpilot_cont_300_bf_scaffold_1337_3
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2181..3851)
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C79FB
metal-dependent hydrolase
Amidohydrolase family protein {ECO:0000313|EMBL:EZP53517.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
SCNpilot_cont_300_bf_scaffold_1337_4
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3848..4687)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F5209
Oxidoreductase {ECO:0000313|EMBL:KHA64168.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;
6-phosphogluconate dehydrogenase
SCNpilot_cont_300_bf_scaffold_1337_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4776..6020
DNA (1245bp) protein (415aa)
threonine dehydratase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003700E2F rbh
DNA, contig: SP610 {ECO:0000313|EMBL:GAN12433.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
threonine dehydratase
SCNpilot_cont_300_bf_scaffold_1337_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6355..7041
DNA (687bp) protein (229aa)
arginyl-tRNA-protein transferase (EC:2.3.2.8)
arginyl-tRNA-protein transferase n=1 Tax=Sphingomonas RepID=UPI00028A237B
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
SCNpilot_cont_300_bf_scaffold_1337_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7086..9107)
DNA (2022bp) protein (674aa)
thiol:disulfide interchange protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B46684 rbh
thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AJP72891.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sp
SCNpilot_cont_300_bf_scaffold_1337_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9152..9547
DNA (396bp) protein (132aa)
Alkaline phosphatase {ECO:0000256|PIRNR:PIRNR031924}; EC=3.1.3.1 {ECO:0000256|PIRNR:PIRNR031924};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
Type I phosphodiesterase / nucleotide pyrophosphatase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X020_9SPHN
alkaline phosphatase
SCNpilot_cont_300_bf_scaffold_1337_9
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9568..10761
DNA (1194bp) protein (398aa)
Alkaline phosphatase {ECO:0000256|PIRNR:PIRNR031924}; EC=3.1.3.1 {ECO:0000256|PIRNR:PIRNR031924};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381161B
alkaline phosphatase
SCNpilot_cont_300_bf_scaffold_1337_10
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10811..13639)
DNA (2829bp) protein (943aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037E4A1E
Uncharacterized protein {ECO:0000313|EMBL:ESQ85702.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
sensory box protein
SCNpilot_cont_300_bf_scaffold_1337_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13725..15023
DNA (1299bp) protein (433aa)
nadE; NAD synthetase (EC:6.3.5.1)
NAD synthetase {ECO:0000313|EMBL:AIT06127.1}; EC=6.3.5.1 {ECO:0000313|EMBL:AIT06127.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphi
NAD synthetase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F35A1
SCNpilot_cont_300_bf_scaffold_1337_12
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(14923..15390)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY13980.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
SCNpilot_cont_300_bf_scaffold_1337_13
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15768..16700)
DNA (933bp) protein (311aa)
fabK; trans-2-enoyl-ACP reductase II (EC:1.3.1.9)
Trans-2-enoyl-ACP reductase II n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BX33_HYPNA rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:KJS24603.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BR
SCNpilot_cont_300_bf_scaffold_1337_14
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16794..18368)
DNA (1575bp) protein (525aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sph
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase [decarboxylating] (Glycine cleavage system P2 protein) n=1 Tax=Sphingomonas sp. S17 RepID=F3X250_9SPHN
SCNpilot_cont_300_bf_scaffold_1337_15
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18365..19651)
DNA (1287bp) protein (429aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796}
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
glycine dehydrogenase subunit 1 n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCB52
SCNpilot_cont_300_bf_scaffold_1337_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19807..20178)
DNA (372bp) protein (124aa)
glycine cleavage system protein H n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000380E40C
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
glycine cleavage system protein H
SCNpilot_cont_300_bf_scaffold_1337_17
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20180..21334)
DNA (1155bp) protein (385aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
aminomethyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3933C rbh
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_1337_18
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21874..22410
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F2805
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1337_19
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22410..24032
DNA (1623bp) protein (541aa)
transcription elongation factor NusA n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B40F4B
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
transcription elongation factor NusA
SCNpilot_cont_300_bf_scaffold_1337_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24032..24253
DNA (222bp) protein (74aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
isomerase n=1 Tax=Sphingomonas melonis RepID=UPI000363D67A
isomerase
SCNpilot_cont_300_bf_scaffold_1337_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24378..24689)
DNA (312bp) protein (104aa)
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028919A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT07849.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
SCNpilot_cont_300_bf_scaffold_1337_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24758..25462
DNA (705bp) protein (235aa)
transcription terminating nucleic-acid-binding protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6C63D
transcription terminating nucleic-acid-binding protein
DNA, contig: SP623 {ECO:0000313|EMBL:GAN13652.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
SCNpilot_cont_300_bf_scaffold_1337_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25463..28183
DNA (2721bp) protein (907aa)
translation initiation factor IF-2 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5E8DC rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
translation initiation factor IF-2 rbh
SCNpilot_cont_300_bf_scaffold_1337_24
unknown

Not on your lists

28264..28368
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1337_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28513..28896
DNA (384bp) protein (128aa)
ribosome-binding factor A n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C0D96
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
rbfA; ribosome-binding factor A
SCNpilot_cont_300_bf_scaffold_1337_26
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29096..29668
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAP5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL49300.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
SCNpilot_cont_300_bf_scaffold_1337_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29763..30353
DNA (591bp) protein (197aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1549858 species="Bacteria; Prote
thymidine kinase (EC:2.7.1.21)
thymidine kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B64783
SCNpilot_cont_300_bf_scaffold_1337_28
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30454..31146
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000365E5D1
peptidase M48 rbh
Peptidase M48 {ECO:0000313|EMBL:AIT06864.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_1337_29
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31143..32108
DNA (966bp) protein (322aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288EFC9 rbh
pseudouridine synthase
SCNpilot_cont_300_bf_scaffold_1337_30
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


32132..32401
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5361A
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
30S ribosomal protein S15
Displaying 30 items

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