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SCNpilot_cont_300_bf_scaffold_565

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_565_1
unknown

Not on your lists

3..263
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_565_2
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

280..1191
DNA (912bp) protein (304aa)
Capsular polysaccharide export protein, putative n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAR8_9SPHN
Capsular polysaccharide export protein, putative {ECO:0000313|EMBL:EDL49323.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter
polysaccharide export protein
SCNpilot_cont_300_bf_scaffold_565_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1217..2548
DNA (1332bp) protein (444aa)
Chain length determinant protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAR9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS41757.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
chain length determinant protein
SCNpilot_cont_300_bf_scaffold_565_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2552..3259
DNA (708bp) protein (236aa)
chain length determinant protein tyrosine kinase EpsG (EC:2.7.10.2)
Diutan polysaccharide export protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z526_9SPHN
Protein-tyrosine kinase {ECO:0000313|EMBL:KHS41756.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
SCNpilot_cont_300_bf_scaffold_565_5
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3249..4154
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAS1_9SPHN
Transmembrane protein EpsH {ECO:0000313|EMBL:KHS41755.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
hypothetical protein
SCNpilot_cont_300_bf_scaffold_565_6
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4151..4852
DNA (702bp) protein (234aa)
GelN n=1 Tax=Sphingomonas elodea RepID=Q840V0_SPHEL
Methanolan biosynthesis EpsI {ECO:0000313|EMBL:KHS41754.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_565_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4875..5480)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3A7_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27666.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
SCNpilot_cont_300_bf_scaffold_565_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5536..6069)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3A7_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27666.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
SCNpilot_cont_300_bf_scaffold_565_9
unknown

Not on your lists

6226..7377
DNA (1152bp) protein (384aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_565_10
unknown

Not on your lists

comp(7490..7858)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_565_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8068..9162
DNA (1095bp) protein (365aa)
Acyltransferase 3 n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SUD1_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP72128.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_565_12
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9159..10418
DNA (1260bp) protein (420aa)
Possible polysaccharide export protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0THB2_PARBH
Uncharacterized protein {ECO:0000313|EMBL:KCZ50119.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54
polysaccharide export protein
SCNpilot_cont_300_bf_scaffold_565_13
unknown

Not on your lists

10418..10663
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_565_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10794..12353
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAQ9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS41769.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
SCNpilot_cont_300_bf_scaffold_565_15
unknown

Not on your lists

comp(12459..12719)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_565_16
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12806..14719)
DNA (1914bp) protein (638aa)
Adenylylsulfate kinase {ECO:0000313|EMBL:AHE54225.1}; EC=2.7.1.25 {ECO:0000313|EMBL:AHE54225.1};; EC=2.7.7.4 {ECO:0000313|EMBL:AHE54225.1};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaprote
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (EC:2.7.7.4) rbh
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S8H4_9SPHN rbh
SCNpilot_cont_300_bf_scaffold_565_17
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14719..15633)
DNA (915bp) protein (305aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4) rbh
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenyla
Sulfate adenylyltransferase subunit 2 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBM1_SPHWW rbh
SCNpilot_cont_300_bf_scaffold_565_18
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15688..16656
DNA (969bp) protein (323aa)
Regulatory protein, LuxR n=2 Tax=Sphingomonas wittichii RepID=A5VBM0_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:AHE54227.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
regulatory protein LuxR
SCNpilot_cont_300_bf_scaffold_565_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16983..17471
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003799C15
calcium-binding protein
Calcium-binding protein {ECO:0000313|EMBL:AIT07664.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
SCNpilot_cont_300_bf_scaffold_565_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17495..18634
DNA (1140bp) protein (380aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
queuine tRNA-ribosyltransferase n=1 Tax=Sphingomonas melonis RepID=UPI0003782012 rbh
queuine tRNA-ribosyltransferase
SCNpilot_cont_300_bf_scaffold_565_21
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18637..18825
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0M2_9SPHN
hypothetical protein
DNA, contig: SP602 {ECO:0000313|EMBL:GAN12060.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
SCNpilot_cont_300_bf_scaffold_565_22
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18852..21665
DNA (2814bp) protein (938aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000380152D rbh
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26186.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
peptidase M16
SCNpilot_cont_300_bf_scaffold_565_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21720..22673
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000366E370
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26185.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
cell wall hydrolase
SCNpilot_cont_300_bf_scaffold_565_24
unknown

Not on your lists

comp(22766..22996)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_565_25
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(23125..23532)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F0E7FC
Surface antigen {ECO:0000313|EMBL:KIY14667.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
surface antigen
SCNpilot_cont_300_bf_scaffold_565_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23650..25908)
DNA (2259bp) protein (753aa)
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28048.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KIU28048.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaprot
malic enzyme (EC:1.1.1.40)
malic enzyme n=1 Tax=Sphingomonas melonis RepID=UPI000376F18B
SCNpilot_cont_300_bf_scaffold_565_27
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25959..26516)
DNA (558bp) protein (186aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFF1_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:KKC23778.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_cont_300_bf_scaffold_565_28
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26566..29166
DNA (2601bp) protein (867aa)
DNA mismatch repair protein MutS n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6549F
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
DNA mismatch repair protein MutS
SCNpilot_cont_300_bf_scaffold_565_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29364..30185)
DNA (822bp) protein (274aa)
LD-carboxypeptidase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZI2_9SPHN rbh
carboxypeptidase
Carboxypeptidase {ECO:0000313|EMBL:AIT06800.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_565_30
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30377..31762
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3B65A
Mur ligase family, catalytic domain protein {ECO:0000313|EMBL:EZP52547.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" so
UDP-N-acetylmuramate--alanine ligase
Displaying items 1-30 of 46 in total

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