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SCNpilot_cont_300_bf_scaffold_645

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Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_645_1
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1574
DNA (1572bp) protein (524aa)
ABC transporter related protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S527_9SPHN rbh
ABC transporter related protein
Uncharacterized protein {ECO:0000313|EMBL:EQB02246.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
SCNpilot_cont_300_bf_scaffold_645_2
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1576..3399
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GPL0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB01918.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_645_3
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3423..4373)
DNA (951bp) protein (317aa)
serine acetyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630D1F rbh
Serine O-acetyltransferase {ECO:0000313|EMBL:EZP56707.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomona
Serine O-acetyltransferase
SCNpilot_cont_300_bf_scaffold_645_4
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4529..6070)
DNA (1542bp) protein (514aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Novosphingobium sp. AP12 RepID=J2H0W4_9SPHN rbh
Scaffold21, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30607.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_645_5
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6099..7559)
DNA (1461bp) protein (487aa)
Amidohydrolase n=1 Tax=Novosphingobium sp. AP12 RepID=J2GV76_9SPHN rbh
Amidohydrolase {ECO:0000313|EMBL:EJL34355.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
amidohydrolase rbh
SCNpilot_cont_300_bf_scaffold_645_6
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7590..8540)
DNA (951bp) protein (317aa)
Outer membrane receptor for ferrienterochelin and colicin n=1 Tax=Novosphingobium sp. AP12 RepID=J3ANZ9_9SPHN
Outer membrane receptor for ferrienterochelin and colicin {ECO:0000313|EMBL:EJL34354.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphi
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_645_7
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8552..9772)
DNA (1221bp) protein (407aa)
Outer membrane receptor for ferrienterochelin and colicin n=1 Tax=Novosphingobium sp. AP12 RepID=J3ANZ9_9SPHN
Outer membrane receptor for ferrienterochelin and colicin {ECO:0000313|EMBL:EJL34354.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphi
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_645_8
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10038..11306
DNA (1269bp) protein (423aa)
SsuD family monooxygenase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HH06_9SPHN rbh
SsuD family monooxygenase {ECO:0000313|EMBL:EQA98684.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium q
SsuD family monooxygenase
SCNpilot_cont_300_bf_scaffold_645_9
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11323..12591
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HM88_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98683.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
type 2 acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_645_10
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12798..15407
DNA (2610bp) protein (870aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GF48_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98687.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
outer membrane receptor protein
SCNpilot_cont_300_bf_scaffold_645_11
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15434..16630
DNA (1197bp) protein (399aa)
alkanesulfonate monooxygenase (EC:1.14.14.5) rbh
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HM94_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98688.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
SCNpilot_cont_300_bf_scaffold_645_12
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16725..18008
DNA (1284bp) protein (428aa)
ssuD3; alkanesulfonate monooxygenase SsuD (EC:1.14.14.5)
Flavin-dependent oxidoreductase, methylene-tetrahydromethanopterin reductase n=1 Tax=Novosphingobium sp. AP12 RepID=J3AA98_9SPHN rbh
Scaffold21, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30604.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
SCNpilot_cont_300_bf_scaffold_645_13
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18005..19558
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GDC9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98681.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_645_14
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20138..20599
DNA (462bp) protein (154aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Novosphingobium sp. AP12 RepID=J2PMS6_9SPHN
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJL28907.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphi
peptide ABC transporter membrane protein
SCNpilot_cont_300_bf_scaffold_645_15
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20599..21438
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HH00_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98679.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
putative dipeptide transport protein (ABC superfamily, membrane)
SCNpilot_cont_300_bf_scaffold_645_16
Pseudomonas sp. CF161, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21438..23228
DNA (1791bp) protein (597aa)
Peptide ABC transporter, ATP-binding protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6K4N3_9PSED rbh
Peptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EPL07023.1}; TaxID=911241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sourc
putative peptide ABC transporter ATP-binding protein rbh
SCNpilot_cont_300_bf_scaffold_645_17
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23263..23640)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000366FE2F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAJ92807.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
SCNpilot_cont_300_bf_scaffold_645_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23870..25228
DNA (1359bp) protein (453aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WUW3_9SPHN
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KHA65246.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon
FAD-dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_645_19
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25248..26081)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HK86_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97998.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
hypothetical protein
SCNpilot_cont_300_bf_scaffold_645_20
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26109..27251)
DNA (1143bp) protein (381aa)
Transcription regulator protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IPT4_HERSS rbh
transcription regulator protein rbh
Transcription regulator protein {ECO:0000313|EMBL:ADJ64981.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspi
SCNpilot_cont_300_bf_scaffold_645_21
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27288..28313
DNA (1026bp) protein (342aa)
AraC family transcription regulator protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IPT5_HERSS rbh
AraC family transcriptional regulator rbh
AraC family transcription regulator protein {ECO:0000313|EMBL:ADJ64982.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" sour
SCNpilot_cont_300_bf_scaffold_645_22
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28406..28900
DNA (495bp) protein (165aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B72109
AsnC-family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:EQB01859.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
SCNpilot_cont_300_bf_scaffold_645_23
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29219..32284
DNA (3066bp) protein (1022aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B75E07 rbh
TonB-dependent receptor {ECO:0000313|EMBL:KEY98058.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
TonB-dependent receptor-like protein rbh
SCNpilot_cont_300_bf_scaffold_645_24
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32303..33880
DNA (1578bp) protein (526aa)
Amidohydrolase n=2 Tax=Sphingobium RepID=T0GDP3_9SPHN rbh
putative amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:KEY98059.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. BHC-A.;
SCNpilot_cont_300_bf_scaffold_645_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33944..34510)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365E77F
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:GAD24889.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
mechanosensitive ion channel protein
SCNpilot_cont_300_bf_scaffold_645_26
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34507..35319)
DNA (813bp) protein (271aa)
Protein FdhD homolog n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWR0_SPHAL
fdhD; FdhD-like protein
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphing
SCNpilot_cont_300_bf_scaffold_645_27
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35693..37090
DNA (1398bp) protein (466aa)
Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP38_AGRRK
two-component response regulator protein
Putative two-component response regulator {ECO:0000313|EMBL:GAJ93462.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
SCNpilot_cont_300_bf_scaffold_645_28
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37083..37325
DNA (243bp) protein (81aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Br
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035C11FB
two-component sensor histidine kinase/response regulator hybrid protein
SCNpilot_cont_300_bf_scaffold_645_29
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37383..39152
DNA (1770bp) protein (590aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; N
Two-component sensor histidine kinase/response regulator hybrid protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N8N3_9RHIZ
two-component sensor histidine kinase/response regulator hybrid protein
SCNpilot_cont_300_bf_scaffold_645_30
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39313..41223
DNA (1911bp) protein (637aa)
Chaperone protein DnaK n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP34_AGRRK
dnaK; chaperone protein (Heat shock protein 70)
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
Displaying items 1-30 of 132 in total

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