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SCNpilot_cont_300_bf_scaffold_748

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_748_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..117)
DNA (117bp) protein (39aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
SCNpilot_cont_300_bf_scaffold_748_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167..646)
DNA (480bp) protein (160aa)
Fur family transcriptional regulator n=1 Tax=Sphingomonas melonis RepID=UPI00036BD2E8
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30165.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
Fur family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_748_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(693..1085)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036B3655
membrane protein
Membrane protein {ECO:0000313|EMBL:AIT05362.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_748_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1222..2250
DNA (1029bp) protein (343aa)
Heme A synthase {ECO:0000256|HAMAP-Rule:MF_01665}; Short=HAS {ECO:0000256|HAMAP-Rule:MF_01665};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_01665};; Cytochrome aa3-controlling protein {ECO:0000256|HAMAP-Ru
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037DDDCF
heme A synthase
SCNpilot_cont_300_bf_scaffold_748_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2247..2561
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E59505
putative divalent ion tolerance protein
Putative divalent ion tolerance protein {ECO:0000313|EMBL:BAK68530.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="
SCNpilot_cont_300_bf_scaffold_748_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3062..3610
DNA (549bp) protein (183aa)
30S ribosomal protein S9 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000378C485
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
rpsI; 30S ribosomal protein S9
SCNpilot_cont_300_bf_scaffold_748_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3879..4574
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDC28
Uncharacterized protein {ECO:0000313|EMBL:AHE55855.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
peptidase
SCNpilot_cont_300_bf_scaffold_748_8
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4564..5166)
DNA (603bp) protein (201aa)
molybdate ABC transporter ATP-binding protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4D6AB
ABC transporter family protein {ECO:0000313|EMBL:EZP51860.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
molybdenum ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_748_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5156..5839)
DNA (684bp) protein (228aa)
Molybdate ABC transporter, permease protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVU9_9SPHN
ModB protein {ECO:0000313|EMBL:GAN12719.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis
molybdate ABC transporter permease
SCNpilot_cont_300_bf_scaffold_748_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5842..6585)
DNA (744bp) protein (248aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVU8_9SPHN
Molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAM01397.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomon
molybdenum ABC transporter substrate-binding protein rbh
SCNpilot_cont_300_bf_scaffold_748_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6710..8506)
DNA (1797bp) protein (599aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
elongation factor 4 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B60773
GTP-binding protein LepA
SCNpilot_cont_300_bf_scaffold_748_12
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8649..9272
DNA (624bp) protein (208aa)
Protein involved in formation of curli polymers n=1 Tax=Novosphingobium sp. AP12 RepID=J2GVI7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP57312.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
curli production assembly/transport component csgg
SCNpilot_cont_300_bf_scaffold_748_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9269..9556
DNA (288bp) protein (96aa)
protein involved in formation of curli polymers n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F4D74B
curli production assembly/transport component csgg
Curli production assembly/transport component csgg {ECO:0000313|EMBL:AIT08032.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomona
SCNpilot_cont_300_bf_scaffold_748_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9751..10272)
DNA (522bp) protein (174aa)
N-acetylglucosamine-6-phosphate isomerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B49B8F
N-acetylglucosamine-6-phosphate isomerase
N-acetylglucosamine-6-phosphate isomerase {ECO:0000313|EMBL:AJP74433.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
SCNpilot_cont_300_bf_scaffold_748_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10269..10841)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B1B4C
nicotinamide mononucleotide transporter
Sphingomonas taxi strain 30a NODE_21, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26978.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
SCNpilot_cont_300_bf_scaffold_748_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10920..12221
DNA (1302bp) protein (434aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289C988
pyridine nucleotide-disulfide oxidoreductase
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AJP72148.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" s
SCNpilot_cont_300_bf_scaffold_748_17
unknown

Not on your lists

12590..13837
DNA (1248bp) protein (416aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_748_18
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13967..15292
DNA (1326bp) protein (442aa)
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:000025
homogentisate 1,2-dioxygenase (EC:1.13.11.5) rbh
homogentisate 1,2-dioxygenase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4AC8E rbh
SCNpilot_cont_300_bf_scaffold_748_19
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15289..15924
DNA (636bp) protein (212aa)
hmgC; maleylacetoacetate isomerase (EC:5.2.1.2) rbh
Maleylacetoacetate isomerase {ECO:0000313|EMBL:BAI98523.1}; EC=5.2.1.2 {ECO:0000313|EMBL:BAI98523.1};; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
maleylacetoacetate isomerase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B33B93 rbh
SCNpilot_cont_300_bf_scaffold_748_20
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15931..16152)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PBV1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL48521.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
membrane protein
SCNpilot_cont_300_bf_scaffold_748_21
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16238..16720
DNA (483bp) protein (161aa)
camphor resistance protein CrcB n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5A427
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sou
camphor resistance protein CrcB
SCNpilot_cont_300_bf_scaffold_748_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16717..17814
DNA (1098bp) protein (366aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
pseudouridine synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B367B2
pseudouridine synthase rbh
SCNpilot_cont_300_bf_scaffold_748_23
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17814..18425
DNA (612bp) protein (204aa)
FMN-binding negative transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A3D1
FMN-binding negative transcriptional regulator
FMN-binding negative transcriptional regulator {ECO:0000313|EMBL:ABZ72806.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sou
SCNpilot_cont_300_bf_scaffold_748_24
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18464..18688)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1WC64_9ZZZZ
membrane protein
Putative membrane protein {ECO:0000313|EMBL:EZP53092.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
SCNpilot_cont_300_bf_scaffold_748_25
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18857..19084
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381C238
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHA62962.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_cont_300_bf_scaffold_748_26
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19081..19770
DNA (690bp) protein (230aa)
ATPase n=1 Tax=Sphingomonas elodea RepID=UPI0002632194
DNA, contig: SP604 {ECO:0000313|EMBL:GAN12144.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
ATPase
SCNpilot_cont_300_bf_scaffold_748_27
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19874..20530)
DNA (657bp) protein (219aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
guanylate kinase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000376F72A rbh
guanylate kinase
SCNpilot_cont_300_bf_scaffold_748_28
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20608..20820)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B61608
Uncharacterized protein {ECO:0000313|EMBL:EZP52509.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_748_29
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20822..22213)
DNA (1392bp) protein (464aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=104605 species="Bacteria; Prote
fumC; fumarate hydratase (EC:4.2.1.2) rbh
fumarate hydratase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3201C rbh
SCNpilot_cont_300_bf_scaffold_748_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22344..22832)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3E246
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT06771.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
Displaying items 1-30 of 46 in total

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