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SCNpilot_cont_300_bf_scaffold_981

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_981_1
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73..1692
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5472E
YD repeat-containing protein {ECO:0000313|EMBL:KCZ97125.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas pol
YD repeat-containing protein
SCNpilot_cont_300_bf_scaffold_981_2
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2059..2295
DNA (237bp) protein (79aa)
YD repeat protein {ECO:0000313|EMBL:ADU15349.1}; Flags: Precursor;; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Ast
SCNpilot_cont_300_bf_scaffold_981_3
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

2340..3233
DNA (894bp) protein (298aa)
Complement C1q protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGU4_NITHX
complement C1q protein
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
SCNpilot_cont_300_bf_scaffold_981_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4108..4470)
DNA (363bp) protein (121aa)
conjugal transfer protein Trbc n=1 Tax=Sphingomonas elodea RepID=UPI0002630A7D
Putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AJA08922.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
SCNpilot_cont_300_bf_scaffold_981_5
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4668..4937
DNA (270bp) protein (90aa)
conjugal transfer protein TrbC n=1 Tax=Sphingomonas elodea RepID=UPI0002630A75
conjugal transfer protein Trbc; K03197 type IV secretion system protein VirB2 Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
Putative secreted protein
SCNpilot_cont_300_bf_scaffold_981_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4941..5225
DNA (285bp) protein (95aa)
type VI secretion protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A76
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA08924.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
SCNpilot_cont_300_bf_scaffold_981_7
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5204..6694
DNA (1491bp) protein (497aa)
type VI secretion protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A77
type IV secretion system protein VirB4
Type IV secretion system protein VirB4 {ECO:0000313|EMBL:AJA08925.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
SCNpilot_cont_300_bf_scaffold_981_8
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6799..7515
DNA (717bp) protein (239aa)
type VI secretion protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5C0A8
type IV secretion system protein VirB4
Type IV secretion system protein VirB4 {ECO:0000313|EMBL:AJA08925.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
SCNpilot_cont_300_bf_scaffold_981_9
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7515..8744
DNA (1230bp) protein (410aa)
conjugal transfer protein TrbL n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5935F rbh
TrbL/VirB6 plasmid conjugal transfer protein rbh
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:AJA08926.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" s
SCNpilot_cont_300_bf_scaffold_981_10
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8741..9628
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A79 rbh
VirB8 family protein rbh
VirB8 family protein {ECO:0000313|EMBL:AJA08927.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis frib
SCNpilot_cont_300_bf_scaffold_981_11
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9625..10329
DNA (705bp) protein (235aa)
type VI secretion protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B47267
conjugal transfer protein trbg/virb9/cagx
Conjugal transfer protein trbg/virb9/cagx {ECO:0000313|EMBL:AJA08928.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sour
SCNpilot_cont_300_bf_scaffold_981_12
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10326..11435
DNA (1110bp) protein (370aa)
conjugal transfer protein TrbI n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4A86F rbh
conjugation TrbI family protein rbh
Conjugation TrbI family protein {ECO:0000313|EMBL:AJA08929.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
SCNpilot_cont_300_bf_scaffold_981_13
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11432..12349
DNA (918bp) protein (306aa)
type VI secretion protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B314CB
type IV secretory pathway VirB11 ATPase
Type IV secretory pathway VirB11 ATPase {ECO:0000313|EMBL:AJA08930.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source
SCNpilot_cont_300_bf_scaffold_981_14
Thalassiosira oceanica, Thalassiosira, Thalassiosirales, Coscinodiscophyceae, Bacillariophyta, Eukaryota

Not on your lists

12447..12983
DNA (537bp) protein (179aa)
Curculin domain-containing protein (mannose-binding) lectin n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C644
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJK46356.1}; TaxID=159749 species="Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae;
SCNpilot_cont_300_bf_scaffold_981_15
Caulobacter sp. JGI 0001013-O16, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13083..13706
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI0003728160
SCNpilot_cont_300_bf_scaffold_981_16

Not on your lists

comp(13673..13912)
DNA (240bp) protein (80aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48458.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_981_17
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14020..14511)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A74
hypothetical protein
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_cont_300_bf_scaffold_981_18
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15041..15259
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A74
hypothetical protein
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_cont_300_bf_scaffold_981_19
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15416..19618
DNA (4203bp) protein (1401aa)
YD repeat-containing protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XVN0_9PROT rbh
YD repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_981_20
unknown

Not on your lists

20501..22747
DNA (2247bp) protein (749aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_981_21
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23874..24782)
DNA (909bp) protein (303aa)
Beta-lactamase-like protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VKH6_CAUST rbh
beta-lactamase-like protein rbh
Beta-lactamase-like protein {ECO:0000313|EMBL:ADG10999.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sou
SCNpilot_cont_300_bf_scaffold_981_22
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24867..25628)
DNA (762bp) protein (254aa)
hydrolase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037B1848 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG10885.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
SCNpilot_cont_300_bf_scaffold_981_23
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25738..26532)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00035F77CA rbh
Putative intracellular protease/amidase {ECO:0000313|EMBL:CDX30270.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="M
ThiJ/PfpI domain-containing protein rbh
SCNpilot_cont_300_bf_scaffold_981_24
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26879..27163
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00035EF846
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EIM67982.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
antibiotic biosynthesis monooxygenase
SCNpilot_cont_300_bf_scaffold_981_25
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27229..28047
DNA (819bp) protein (273aa)
non-heme haloperoxidase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037DB139 rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJJ30159.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobiu
non-heme haloperoxidase rbh
SCNpilot_cont_300_bf_scaffold_981_26
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28243..30888
DNA (2646bp) protein (882aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037F027B rbh
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ABZ69755.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K
SCNpilot_cont_300_bf_scaffold_981_27
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31475..32113
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003717408 rbh
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABZ69754.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.
SCNpilot_cont_300_bf_scaffold_981_28
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32353..32871
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036EFA9B
Transcriptional regulator, winged helix family
Transcriptional regulator, winged helix family {ECO:0000313|EMBL:CDN48870.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
SCNpilot_cont_300_bf_scaffold_981_29
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32956..33969
DNA (1014bp) protein (338aa)
D-threo-aldose 1-dehydrogenase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLR0_AGRRK
D-threo-aldose 1-dehydrogenase {ECO:0000313|EMBL:AHE55205.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
D-threo-aldose 1-dehydrogenase
SCNpilot_cont_300_bf_scaffold_981_30
unknown

Not on your lists

34273..34878
DNA (606bp) protein (202aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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