name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_1146_1
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..203)
|
topB; DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=340100 species="Bacteria; Proteobac
DNA topoisomerase n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BT95_XANC5
|
|
SCNpilot_expt_300_bf_scaffold_1146_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(475..915)
|
Single-stranded DNA-binding protein n=3 Tax=Proteobacteria RepID=A9C2X6_DELAS
single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
|
|
SCNpilot_expt_300_bf_scaffold_1146_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(989..1516)
|
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IB45_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU97042.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
|
|
SCNpilot_expt_300_bf_scaffold_1146_4
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1513..2289)
|
Uncharacterized protein n=5 Tax=Proteobacteria RepID=A9IEN0_BORPD
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:CDF84532.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knack
|
|
SCNpilot_expt_300_bf_scaffold_1146_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2735..3943)
|
Uncharacterized protein n=2 Tax=Proteobacteria RepID=A4G6I3_HERAR
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD44555.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
|
|
SCNpilot_expt_300_bf_scaffold_1146_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3947..4507)
|
COG0635: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases n=50 Tax=Proteobacteria RepID=B7V579_PSEA8
putative regulator
Uncharacterized protein {ECO:0000313|EMBL:ERV83029.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
|
|
SCNpilot_expt_300_bf_scaffold_1146_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4523..6142)
|
Predicted transcriptional regulator n=3 Tax=Pseudomonas aeruginosa RepID=E2ZUF4_PSEAI
hypothetical protein
Integrating conjugative element, PFGI_1 class, ParB family protein {ECO:0000313|EMBL:ETU97046.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadacea
|
|
SCNpilot_expt_300_bf_scaffold_1146_8
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6127..6387)
|
Cobyrinic acid a,c-diamide synthase n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4UIQ8_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EIF31870.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. C
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_1146_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6371..7246)
|
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:EIK90793.1}; EC=2.7.10.2 {ECO:0000313|EMBL:EIK90793.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
Cobyrinic acid a,c-diamide synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNK3_9BURK
cobyrinic acid a,c-diamide synthase
|
|
SCNpilot_expt_300_bf_scaffold_1146_10
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7288..7500)
|
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8L9R4_PSEAI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ERI33723.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EG
|
|
SCNpilot_expt_300_bf_scaffold_1146_11
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7619..8365)
|
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8BIP1_PSEAI
rbh
Uncharacterized protein {ECO:0000313|EMBL:KFJ91150.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_1146_12
unknown
|
Not on your lists |
comp(8591..8785)
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_1146_13
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8946..9485)
|
Integrase n=2 Tax=Gammaproteobacteria RepID=G4LMX3_PSEAI
integrase
Integrase {ECO:0000313|EMBL:EED37049.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.
|
|
SCNpilot_expt_300_bf_scaffold_1146_14
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9430..10851)
|
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N7W5_PSEAI
rbh
intB13; phage-related integrase
Phage-related integrase {ECO:0000313|EMBL:CAP44665.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
|
|
SCNpilot_expt_300_bf_scaffold_1146_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11281..11823)
|
Transcriptional regulator, Rrf2 family n=2 Tax=Alicycliphilus denitrificans RepID=E8TXD2_ALIDB
rbh
BadM/Rrf2 family transcriptional regulator
rbh
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:AEB84343.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source
|
|
SCNpilot_expt_300_bf_scaffold_1146_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11988..12371)
|
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXD3_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO23776.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
|
|
SCNpilot_expt_300_bf_scaffold_1146_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12445..12705
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXD4_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84344.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
|
|
SCNpilot_expt_300_bf_scaffold_1146_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12717..13592)
|
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=160329
Phosphatidylserine decarboxylase proenzyme n=2 Tax=Alicycliphilus denitrificans RepID=E8TXD5_ALIDB
rbh
phosphatidylserine decarboxylase
rbh
|
|
SCNpilot_expt_300_bf_scaffold_1146_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13788..14975
|
CBS domain containing membrane protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7A2_ALIDK
rbh
CBS domain-containing protein {ECO:0000313|EMBL:GAO21755.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
hypothetical protein
rbh
|
|
SCNpilot_expt_300_bf_scaffold_1146_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15220..15480
|
Translation initiation factor IF-1 n=2 Tax=Alicycliphilus denitrificans RepID=E8TXD7_ALIDB
translation initiation factor if-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
|
|
SCNpilot_expt_300_bf_scaffold_1146_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15715..16488
|
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7A5_ALIDK
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB84349.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
|
|
SCNpilot_expt_300_bf_scaffold_1146_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16500..16793)
|
Integration host factor, beta subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TXE0_ALIDB
integration host factor subunit beta
Integration host factor, beta subunit {ECO:0000313|EMBL:AEB84350.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
|
|
SCNpilot_expt_300_bf_scaffold_1146_23
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16867..18552)
|
30S ribosomal protein S1 n=2 Tax=Alicycliphilus denitrificans RepID=E8TXE1_ALIDB
rbh
30S ribosomal protein S1
rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
|
|
SCNpilot_expt_300_bf_scaffold_1146_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18733..20748)
|
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240533};; TaxID=596154 s
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7A8_ALIDK
rbh
|
|
SCNpilot_expt_300_bf_scaffold_1146_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20748..21632)
|
prephenate dehydrogenase (EC:1.3.1.12)
rbh
Prephenate dehydrogenase {ECO:0000313|EMBL:ADU99598.1}; EC=1.3.1.12 {ECO:0000313|EMBL:ADU99598.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Prephenate dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXE3_ALIDB
rbh
|
|
SCNpilot_expt_300_bf_scaffold_1146_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21643..22758)
|
Chorismate mutase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7B0_ALIDK
rbh
chorismate mutase
rbh
Chorismate mutase {ECO:0000313|EMBL:AEB84354.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrifi
|
|
SCNpilot_expt_300_bf_scaffold_1146_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22862..23971)
|
phosphoserine aminotransferase (EC:2.6.1.52)
rbh
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
Phosphoserine aminotransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7B1_ALIDK
rbh
|
|
SCNpilot_expt_300_bf_scaffold_1146_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24038..24520)
|
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
DNA gyrase subunit A n=2 Tax=Alicycliphilus denitrificans RepID=E8TXE6_ALIDB
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_300_bf_scaffold_1146_29].
|
|
SCNpilot_expt_300_bf_scaffold_1146_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24463..26664)
|
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
DNA gyrase subunit A n=2 Tax=Alicycliphilus denitrificans RepID=E8TXE6_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_1146_30
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26841..27503
|
OmpA/MotB domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXE7_ALIDB
rbh
ompa/motb domain-containing protein
rbh
OmpA/MotB domain-containing protein {ECO:0000313|EMBL:GAO23748.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
|