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SCNpilot_expt_300_bf_scaffold_1298

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1298_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..481
DNA (480bp) protein (160aa)
teichoic-acid-transporting AtPase (EC:3.6.3.40)
ABC transporter related protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1E8_ACIDE
ABC transporter related protein {ECO:0000313|EMBL:EER61706.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax del
SCNpilot_expt_300_bf_scaffold_1298_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

497..1396
DNA (900bp) protein (300aa)
Methyltransferase type 12 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1E9_ACIDE rbh
type 12 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
type 12 methyltransferase
SCNpilot_expt_300_bf_scaffold_1298_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1393..2256
DNA (864bp) protein (288aa)
Methyltransferase type 12 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AWL2_DELSC rbh
Methyltransferase type 12 {ECO:0000313|EMBL:EZP58784.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
type 12 methyltransferase
SCNpilot_expt_300_bf_scaffold_1298_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2321..6001)
DNA (3681bp) protein (1227aa)
Family 2 glycosyl transferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT07_9BURK
Family 2 glycosyl transferase {ECO:0000313|EMBL:EHL24501.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. N
family 2 glycosyl transferase
SCNpilot_expt_300_bf_scaffold_1298_5
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6162..6914
DNA (753bp) protein (251aa)
Glycosyl transferase, family 2 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WH91_VEREI rbh
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABM56998.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminep
SCNpilot_expt_300_bf_scaffold_1298_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6911..8011
DNA (1101bp) protein (367aa)
Glycosyl transferase, family 4, conserved region protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TY40_ALIDB rbh
glycosyl transferase rbh
Glycosyl transferase, family 4, conserved region protein {ECO:0000313|EMBL:ADU98439.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
SCNpilot_expt_300_bf_scaffold_1298_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8072..8962
DNA (891bp) protein (297aa)
acetylglutamate kinase (EC:2.7.2.8) rbh
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rul
Acetylglutamate kinase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY41_ALIDB rbh
SCNpilot_expt_300_bf_scaffold_1298_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9145..9780
DNA (636bp) protein (212aa)
Regulatory protein TetR n=2 Tax=Alicycliphilus denitrificans RepID=E8TY42_ALIDB rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:GAO26374.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
regulatory protein tetr rbh
SCNpilot_expt_300_bf_scaffold_1298_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10176..10832
DNA (657bp) protein (219aa)
Regulatory protein TetR n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5F8_ALIDK rbh
TetR family transcriptional regulator rbh
Regulatory protein TetR {ECO:0000313|EMBL:AEB83050.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_1298_10
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10811..12142)
DNA (1332bp) protein (444aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JVY5_BURP1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWS64258.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1298_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12681..13109
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TY45_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83052.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_expt_300_bf_scaffold_1298_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13131..15533
DNA (2403bp) protein (801aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5G1_ALIDK rbh
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEB83053.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein rbh
SCNpilot_expt_300_bf_scaffold_1298_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15535..16062
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X6N1_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU47994.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
SCNpilot_expt_300_bf_scaffold_1298_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16083..17276
DNA (1194bp) protein (398aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16) rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEB83054.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AEB83054.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
Acetyl-CoA acetyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5G2_ALIDK rbh
SCNpilot_expt_300_bf_scaffold_1298_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17312..18145
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TY48_ALIDB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB83055.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_1298_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18153..18929
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase/isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY49_ALIDB rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEB83056.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_expt_300_bf_scaffold_1298_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19078..19557
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5G5_ALIDK
hypothetical protein
Integral membrane protein CcmA {ECO:0000313|EMBL:GAO26383.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
SCNpilot_expt_300_bf_scaffold_1298_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19638..20063)
DNA (426bp) protein (142aa)
Thioesterase superfamily protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY51_ALIDB
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADU98450.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
SCNpilot_expt_300_bf_scaffold_1298_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20106..21995
DNA (1890bp) protein (630aa)
ABC transporter related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY52_ALIDB rbh
ABC transporter related protein {ECO:0000313|EMBL:ADU98451.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
ABC transporter rbh
SCNpilot_expt_300_bf_scaffold_1298_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22325..23929
DNA (1605bp) protein (535aa)
AMP-dependent synthetase and ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY53_ALIDB rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADU98452.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
AMP-dependent synthetase/ligase rbh
SCNpilot_expt_300_bf_scaffold_1298_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23933..24403
DNA (471bp) protein (157aa)
MaoC domain protein dehydratase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY54_ALIDB rbh
MaoC domain-containing protein rbh
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADU98453.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
SCNpilot_expt_300_bf_scaffold_1298_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24443..25438
DNA (996bp) protein (332aa)
Putative NagM-like protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY55_ALIDB rbh
nagm-like protein rbh
Putative NagM-like protein {ECO:0000313|EMBL:ADU98454.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sour
SCNpilot_expt_300_bf_scaffold_1298_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25487..26464
DNA (978bp) protein (326aa)
2-nitropropane dioxygenase NPD n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY56_ALIDB rbh
2-nitropropane dioxygenase rbh
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ADU98455.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
SCNpilot_expt_300_bf_scaffold_1298_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26820..27422
DNA (603bp) protein (201aa)
LysR substrate-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY57_ALIDB rbh
LysR family transcriptional regulator
LysR substrate-binding protein {ECO:0000313|EMBL:ADU98456.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
SCNpilot_expt_300_bf_scaffold_1298_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28790..29353)
DNA (564bp) protein (188aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY59_ALIDB
trap dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ADU98458.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alic
Displaying 25 items

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