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SCNpilot_expt_300_bf_scaffold_692

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_692_1
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192..1172)
DNA (981bp) protein (327aa)
Putative exported protein n=6 Tax=Bordetella bronchiseptica RepID=K0MYN8_BORBM rbh
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KCV63955.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;"
hypothetical protein rbh
SCNpilot_expt_300_bf_scaffold_692_2
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1209..1718)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S723_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHP41834.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basile
MaoC domain-containing protein dehydratase
SCNpilot_expt_300_bf_scaffold_692_3
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1949..3169
DNA (1221bp) protein (407aa)
Putative thiolase n=3 Tax=Bordetella bronchiseptica RepID=K4QQF5_BORBO
Thiolase {ECO:0000313|EMBL:KGD96044.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
thiolase
SCNpilot_expt_300_bf_scaffold_692_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3192..4463)
DNA (1272bp) protein (424aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ADU98252.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ADU98252.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
Nucleotide sugar dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWB4_ALIDB
SCNpilot_expt_300_bf_scaffold_692_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4460..5470)
DNA (1011bp) protein (337aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWB5_ALIDB rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADU98253.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_expt_300_bf_scaffold_692_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5467..6981)
DNA (1515bp) protein (505aa)
Glycosyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWB6_ALIDB rbh
Glycosyl transferase {ECO:0000313|EMBL:KJA12019.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
glycosyltransferase rbh
SCNpilot_expt_300_bf_scaffold_692_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7087..8118
DNA (1032bp) protein (344aa)
Glycosyl transferase family 2 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3N2_ALIDK rbh
family 2 glycosyl transferase rbh
Family 2 glycosyl transferase {ECO:0000313|EMBL:GAO26174.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
SCNpilot_expt_300_bf_scaffold_692_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8115..8990
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W339_ACISJ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM40664.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_expt_300_bf_scaffold_692_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9063..9905)
DNA (843bp) protein (281aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3N4_ALIDK rbh
ribosomal RNA small subunit methyltransferase I rbh
SCNpilot_expt_300_bf_scaffold_692_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9977..10384
DNA (408bp) protein (136aa)
UPF0102 protein Alide2_0444 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3N5_ALIDK
hypothetical protein
UPF0102 protein ALISP_1263 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
SCNpilot_expt_300_bf_scaffold_692_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10444..11046
DNA (603bp) protein (201aa)
Phosphoheptose isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TWC1_ALIDB rbh
sugar isomerase (SIS) rbh
Sugar isomerase (SIS) {ECO:0000313|EMBL:AEB82864.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
SCNpilot_expt_300_bf_scaffold_692_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11043..11711
DNA (669bp) protein (223aa)
Transport-associated protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWC2_ALIDB rbh
transport-associated protein rbh
Transport-associated protein {ECO:0000313|EMBL:GAO21441.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_expt_300_bf_scaffold_692_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11715..12647)
DNA (933bp) protein (311aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) rbh
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ADU98261.1}; EC=1.1.1.60 {ECO:0000313|EMBL:ADU98261.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
2-hydroxy-3-oxopropionate reductase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWC3_ALIDB rbh
SCNpilot_expt_300_bf_scaffold_692_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12722..13234)
DNA (513bp) protein (171aa)
Twitching motility protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWC4_ALIDB
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:AEB82867.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
SCNpilot_expt_300_bf_scaffold_692_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13240..13788)
DNA (549bp) protein (183aa)
Twitching motility protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWC4_ALIDB
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ADU98262.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
SCNpilot_expt_300_bf_scaffold_692_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13814..14443)
DNA (630bp) protein (210aa)
Cyclic nucleotide-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWC5_ALIDB rbh
Crp/Fnr family transcriptional regulator rbh
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ADU98263.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
SCNpilot_expt_300_bf_scaffold_692_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14507..15550)
DNA (1044bp) protein (348aa)
Twitching motility protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWC6_ALIDB rbh
twitching motility protein rbh
Twitching mobility protein transport fimbria {ECO:0000313|EMBL:GAO26183.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sour
SCNpilot_expt_300_bf_scaffold_692_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15590..16312
DNA (723bp) protein (241aa)
Alanine racemase domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWC7_ALIDB rbh
alanine racemase rbh
Alanine racemase domain protein {ECO:0000313|EMBL:ADU98265.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
SCNpilot_expt_300_bf_scaffold_692_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16353..17483
DNA (1131bp) protein (377aa)
Aminotransferase class V n=2 Tax=Alicycliphilus denitrificans RepID=E8TWC8_ALIDB rbh
class V aminotransferase rbh
Aminotransferase class V {ECO:0000313|EMBL:ADU98266.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus de
SCNpilot_expt_300_bf_scaffold_692_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17544..17966)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWC9_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU98267.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_expt_300_bf_scaffold_692_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18151..19452
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3P5_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO26187.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
SCNpilot_expt_300_bf_scaffold_692_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19510..21003)
DNA (1494bp) protein (498aa)
D-lactate dehydrogenase (EC:1.1.2.4) rbh
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3P6_ALIDK rbh
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:GAO26188.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sour
SCNpilot_expt_300_bf_scaffold_692_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21067..21963)
DNA (897bp) protein (299aa)
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWD2_ALIDB rbh
LysR family transcriptional regulator rbh
LysR substrate-binding protein {ECO:0000313|EMBL:ADU98270.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
SCNpilot_expt_300_bf_scaffold_692_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21963..22811)
DNA (849bp) protein (283aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=596154 species="Ba
Formyltetrahydrofolate deformylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TWD3_ALIDB rbh
formyltetrahydrofolate deformylase rbh
SCNpilot_expt_300_bf_scaffold_692_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22982..25477
DNA (2496bp) protein (832aa)
Diguanylate cyclase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWD4_ALIDB rbh
diguanylate cyclase rbh
Diguanylate cyclase {ECO:0000313|EMBL:ADU98272.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitri
SCNpilot_expt_300_bf_scaffold_692_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25478..26341)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3Q0_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB82878.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_expt_300_bf_scaffold_692_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26608..29043
DNA (2436bp) protein (812aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:AEB82879.1}; EC=1.17.4.1 {ECO:0000313|EMBL:AEB82879.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteob
ribonucleoside-diphosphate reductase (EC:1.17.4.1) rbh
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3Q1_ALIDK rbh
SCNpilot_expt_300_bf_scaffold_692_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29222..31135
DNA (1914bp) protein (638aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Multi-sensor signal transduction histidine kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3Q2_ALIDK rbh
multi-sensor signal transduction histidine kinase rbh
SCNpilot_expt_300_bf_scaffold_692_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31132..31806
DNA (675bp) protein (225aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3Q3_ALIDK rbh
two component LuxR family transcriptional regulator rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEB82881.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.
SCNpilot_expt_300_bf_scaffold_692_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32076..33371
DNA (1296bp) protein (432aa)
Major facilitator superfamily MFS_1 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3Q4_ALIDK rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEB82882.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
Displaying items 1-30 of 34 in total

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