ggKbase home page

SCNpilot_expt_300_bf_scaffold_568_3

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(3021..3443)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000377EE86 similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 138.0
  • Bit_score: 121
  • Evalue 5.30e-25
Uncharacterized protein {ECO:0000313|EMBL:KDC52653.1}; TaxID=43655 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoa similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 140.0
  • Bit_score: 104
  • Evalue 1.20e-19
transcriptional regulator, TetR family domain protein similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 126.0
  • Bit_score: 92
  • Evalue 1.30e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoalteromonas citrea → Pseudoalteromonas → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGGAAGACCTGTCCCATTGGCCGCTGGTGGTGGGCGTTTACCGCGAGGAGGCAACGCTGCAGGCGTACCAGGCCCAACTCGACAGCTGGCAGGCCTGGTTCGCGCGCGAGCAGCCCTTCGCTCTGCTGCGCGTCTATGCCACGCCCGGGTCGCTGGCGCACCCCGAGGGAAGCGCGGCGGCTGGCAAGTCCTGGCTGGCGCAGAACCGCCCCCTGCTGCAGCGCTGGGTCATCGGCATGGCGACGGTGATCCTGCCGCCGCAGGACTACGCCCGGCTCAAGAACATGCAGGTGGAAAAGGCGTTCGGGGTGCCCGGCGGCGTGTTCGCCTCGGTGGAGGAGGCGATCGTCTGGTTGCAGCGGGAGGTGTTCGAGCCTGCCGGGATGCAGGTGCCGATCGGGGCGGCGGACGTAGCGGCCTGA
PROTEIN sequence
Length: 141
MEDLSHWPLVVGVYREEATLQAYQAQLDSWQAWFAREQPFALLRVYATPGSLAHPEGSAAAGKSWLAQNRPLLQRWVIGMATVILPPQDYARLKNMQVEKAFGVPGGVFASVEEAIVWLQREVFEPAGMQVPIGAADVAA*