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SCNpilot_expt_300_bf_scaffold_568

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_568_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1856)
DNA (1854bp) protein (618aa)
Putative receptor n=2 Tax=Pseudomonas stutzeri RepID=Q9L8Q7_PSEST rbh
Putative receptor {ECO:0000313|EMBL:AAF33135.1}; Flags: Precursor;; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
TonB-dependent receptor rbh
SCNpilot_expt_300_bf_scaffold_568_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1984..2925
DNA (942bp) protein (314aa)
UPI0003D6352D related cluster n=1 Tax=unknown RepID=UPI0003D6352D rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHC45620.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylo
SCNpilot_expt_300_bf_scaffold_568_3
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3021..3443)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000377EE86
Uncharacterized protein {ECO:0000313|EMBL:KDC52653.1}; TaxID=43655 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoa
transcriptional regulator, TetR family domain protein
SCNpilot_expt_300_bf_scaffold_568_4
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3446..5203)
DNA (1758bp) protein (586aa)
ABC transporter ATP-binding/permease protein n=1 Tax=Pseudomonas syringae pv. morsprunorum str. M302280 RepID=F3DWK4_9PSED rbh
ABC transporter ATP-binding/permease protein {ECO:0000313|EMBL:EGH10404.1}; TaxID=629259 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudom
ABC transporter ATP-binding protein/permease
SCNpilot_expt_300_bf_scaffold_568_5
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5200..6957)
DNA (1758bp) protein (586aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=E2MGK6_PSEUB rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGK95858.1}; TaxID=323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
ABC transporter ATP-binding protein/permease rbh
SCNpilot_expt_300_bf_scaffold_568_6
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7039..8253)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QSZ7_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ETF02455.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
major facilitator superfamily domain-containing protein rbh
SCNpilot_expt_300_bf_scaffold_568_7
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8270..10306)
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QR53_9BURK rbh
TonB-dependent receptor Plug domain-containing protein rbh
TonB-dependent receptor Plug domain-containing protein {ECO:0000313|EMBL:AHG62996.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Ad
SCNpilot_expt_300_bf_scaffold_568_8
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10412..11338
DNA (927bp) protein (309aa)
Transcriptional regulator, AraC family n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E7K7_9GAMM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EGV27940.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thior
transcriptional regulator, AraC family
SCNpilot_expt_300_bf_scaffold_568_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11409..12626)
DNA (1218bp) protein (406aa)
UPI0003D68D1D related cluster n=1 Tax=unknown RepID=UPI0003D68D1D rbh
hypothetical protein
Muropeptide transporter {ECO:0000313|EMBL:CKG97532.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxy
SCNpilot_expt_300_bf_scaffold_568_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12616..14727)
DNA (2112bp) protein (704aa)
UPI0003D6989E related cluster n=1 Tax=unknown RepID=UPI0003D6989E rbh
iron aquisition outermembrane yersiniabactin receptor (FyuA,Psn,pesticin receptor)
Iron aquisition outermembrane yersiniabactin receptor (FyuA,Psn,pesticin receptor) {ECO:0000313|EMBL:AHC45648.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_expt_300_bf_scaffold_568_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14842..15807
DNA (966bp) protein (322aa)
AraC family transcription regulator protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T2L1_ALCXX
Transcriptional activator FtrA {ECO:0000313|EMBL:CKG97560.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes x
Transcriptional regulator, AraC family
SCNpilot_expt_300_bf_scaffold_568_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15843..16289
DNA (447bp) protein (149aa)
azurin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037820C1
Azurin {ECO:0000313|EMBL:GAD23505.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
azurin
SCNpilot_expt_300_bf_scaffold_568_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16582..17019
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003605194
Uncharacterized protein {ECO:0000313|EMBL:GAD23590.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_expt_300_bf_scaffold_568_14
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17016..17504
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A662
Uncharacterized protein {ECO:0000313|EMBL:ENO90379.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lo
hypothetical protein
SCNpilot_expt_300_bf_scaffold_568_15
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17562..18068
DNA (507bp) protein (169aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae;
superoxide dismutase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A167
manganese and iron superoxide dismutase
SCNpilot_expt_300_bf_scaffold_568_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18152..19060
DNA (909bp) protein (303aa)
UPI0003D3EC9B related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3EC9B rbh
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:GAD23592.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
zinc/iron permease
SCNpilot_expt_300_bf_scaffold_568_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19095..19430)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT42_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:GAO23353.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
hypothetical protein
SCNpilot_expt_300_bf_scaffold_568_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19577..20263
DNA (687bp) protein (229aa)
Heavy metal response regulator n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT43_ALIDB
Two component heavy metal response transcriptional regulator {ECO:0000313|EMBL:GAO23354.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicyc
heavy metal response regulator
SCNpilot_expt_300_bf_scaffold_568_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20359..21276
DNA (918bp) protein (306aa)
Heavy metal sensor kinase n=1 Tax=Ralstonia sp. PBA RepID=I9KS01_9RALS
Heavy metal sensor kinase {ECO:0000313|EMBL:GAO23355.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
heavy metal sensor kinase
Displaying 19 items

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