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SCNpilot_solid_1_scaffold_34

Search features with annotation key words

Displaying items 31-60 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_34_31
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30653..30961)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD10_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97219.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_34_32
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30972..34196)
DNA (3225bp) protein (1075aa)
Acriflavin resistance protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YD31_9SPHI
Acriflavin resistance protein {ECO:0000313|EMBL:EHQ26088.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucil
acriflavin resistance protein
SCNpilot_solid_1_scaffold_34_33
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34277..35392)
DNA (1116bp) protein (372aa)
Putative Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNU1_9SPHI
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:EOR93381.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arctic
RND family efflux transporter MFP subunit
SCNpilot_solid_1_scaffold_34_34
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35410..36798)
DNA (1389bp) protein (463aa)
Outer membrane efflux family protein, putative n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNG0_9SPHI
Outer membrane efflux family protein, putative {ECO:0000313|EMBL:EOR93382.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;
outer membrane efflux protein
SCNpilot_solid_1_scaffold_34_35
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36845..37825
DNA (981bp) protein (327aa)
CHAD domain-containing protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQC8_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:GAO44017.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
CHAD domain-containing protein
SCNpilot_solid_1_scaffold_34_36
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37873..38928
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGY4_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV99586.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_34_37
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38952..39335)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ92_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98625.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_34_38
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39366..39839)
DNA (474bp) protein (158aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ97_NIAKG
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AEV98630.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Nias
SCNpilot_solid_1_scaffold_34_39
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40023..40421
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD61_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90576.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_34_40
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40418..41473)
DNA (1056bp) protein (352aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBU1_NIAKG rbh
Transcriptional regulator {ECO:0000313|EMBL:KIC90577.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibac
CarD family transcriptional regulator
SCNpilot_solid_1_scaffold_34_41
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41477..42721)
DNA (1245bp) protein (415aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; N
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD71_NIAKG rbh
PAS/PAC sensor signal transduction histidine kinase rbh
SCNpilot_solid_1_scaffold_34_42
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42864..43619)
DNA (756bp) protein (252aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD72_NIAKG
hemerythrin hhE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:AEV98304.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source=
SCNpilot_solid_1_scaffold_34_43
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43769..46291)
DNA (2523bp) protein (841aa)
Cation transport ATPase {ECO:0000313|EMBL:EIA08145.1}; EC=3.6.1.- {ECO:0000313|EMBL:EIA08145.1};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; F
ATPase P (EC:3.6.3.8)
haloacid dehalogenase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00031D757E rbh
SCNpilot_solid_1_scaffold_34_44
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(46405..48891)
DNA (2487bp) protein (829aa)
TonB-dependent receptor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1K2_DYAFD rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACT93732.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
SCNpilot_solid_1_scaffold_34_45
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48999..49976)
DNA (978bp) protein (326aa)
diaminopimelate dehydrogenase (EC:1.4.1.16) rbh
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:ADY51819.1}; EC=1.4.1.16 {ECO:0000313|EMBL:ADY51819.1};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobac
Diaminopimelate dehydrogenase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDS3_PEDSD rbh
SCNpilot_solid_1_scaffold_34_46
unknown

Not on your lists

comp(50326..50448)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_34_47
unknown

Not on your lists

comp(50478..50951)
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_34_48
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52479..52778)
DNA (300bp) protein (100aa)
plasmid stabilization protein n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI000363DF0C
Plasmid stabilization protein {ECO:0000313|EMBL:KGD68394.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteri
parE; Toxin ParE
SCNpilot_solid_1_scaffold_34_49
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52771..53022)
DNA (252bp) protein (84aa)
antitoxin n=1 Tax=Segetibacter koreensis RepID=UPI00035C0A37
Antitoxin {ECO:0000313|EMBL:KGD68395.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008
parD1; Antitoxin ParD1
SCNpilot_solid_1_scaffold_34_50
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53117..53761)
DNA (645bp) protein (215aa)
Transposase IS4 family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE78_CHIPD
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ACU61148.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophag
SCNpilot_solid_1_scaffold_34_51
unknown

Not on your lists

comp(53862..54077)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_34_52
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

54244..55095
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAR7_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV99247.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_34_53
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(55341..57485)
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EML4_RUNSL rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50985.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformi
SCNpilot_solid_1_scaffold_34_54
unknown

Not on your lists

comp(57755..57856)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_34_55
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58293..58796
DNA (504bp) protein (168aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAU3_NIAKG
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AEW00286.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="
SCNpilot_solid_1_scaffold_34_56
unknown

Not on your lists

58777..59034
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_34_57
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

59036..59692
DNA (657bp) protein (219aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMK9_9BACT
clpP; ATP-dependent Clp protease proteolytic subunit
SCNpilot_solid_1_scaffold_34_58
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

60537..61592
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R707_OWEHD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV33372.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenwe
SCNpilot_solid_1_scaffold_34_59
unknown

Not on your lists

61611..62171
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_34_60
unknown

Not on your lists

comp(62735..62857)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying items 31-60 of 126 in total

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