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SCNpilot_solid_1_scaffold_34_55

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 58293..58796

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAU3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 163.0
  • Bit_score: 139
  • Evalue 3.80e-30
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 163.0
  • Bit_score: 139
  • Evalue 1.10e-30
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AEW00286.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 163.0
  • Bit_score: 139
  • Evalue 5.40e-30

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 504
ATGGAGCACGAAAGTTTAGTTGAATTATACCGGGAAGTCTTTCCCGAAGCAGCGCGCTTAATAAAACGTTTGGGTGGAAGTCTTGAAGAAGCGGATGATGCTTTTCATGATGCGCTATTGATATATCTTGAAAGAGAAGCAAAAGGTACATTGCAAATTCATACTTCAGCAAAAGCATATTTGCTGGGCACTGCTAAAATACTTTGGCTTCACTCTAAAGATCAGTATTTCGATTCGTTGCCGGAAGATGTTGAGGCATTTGTTGATGAAGAAAATGAAGCTGCAGATGAATATAAAAATATTTTTCACTACTTAATGCTGGCAGGACAAAAATGTTTACACATGCTCAAAGCGTTTTATTACGATAATCTTTCGCTTCAACAAATCGCTACAAGTTTTGGGTATAATGGCGTTCGTTCGGCAACAGTACAAAAACATAAGTGCATTGAAAAAATCCGGGTAGAGCTAAAAAAAAGAAATGTATATGAGGAACGATTTAATTGA
PROTEIN sequence
Length: 168
MEHESLVELYREVFPEAARLIKRLGGSLEEADDAFHDALLIYLEREAKGTLQIHTSAKAYLLGTAKILWLHSKDQYFDSLPEDVEAFVDEENEAADEYKNIFHYLMLAGQKCLHMLKAFYYDNLSLQQIATSFGYNGVRSATVQKHKCIEKIRVELKKRNVYEERFN*