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SCNpilot_solid_1_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_109_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(143..505)
DNA (363bp) protein (121aa)
Putative transmembrane protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8E6_NIAKG
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AEV99116.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kore
SCNpilot_solid_1_scaffold_109_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(647..4051)
DNA (3405bp) protein (1135aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=700598 species="Bacteria; Ba
Transcription-repair-coupling factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL35_NIAKG rbh
transcription-repair coupling factor
SCNpilot_solid_1_scaffold_109_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4210..5265
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP44_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW03162.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_109_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5505..8786)
DNA (3282bp) protein (1094aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=714943 species="Bacteria; Bactero
Leucine--tRNA ligase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEZ9_9SPHI rbh
leucyl-tRNA synthetase
SCNpilot_solid_1_scaffold_109_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9046..9918
DNA (873bp) protein (291aa)
Cell division protein FtsX n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ64_CHIPD
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
hypothetical protein
SCNpilot_solid_1_scaffold_109_6

Not on your lists


9946..10977
DNA (1032bp) protein (344aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|SAAS:SAAS00089474};; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Niabella aurantiaca RepID=UPI00036F1EDF
phenylalanyl-tRNA synthetase subunit alpha
SCNpilot_solid_1_scaffold_109_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11119..12087
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F6713 rbh
NAD-dependent epimerase/dehydratase Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
NAD-dependent epimerase/dehydratase
SCNpilot_solid_1_scaffold_109_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12232..13461
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIK4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92158.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_109_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13576..14526)
DNA (951bp) protein (317aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIK1_NIAKG rbh
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase {ECO:0000313|EMBL:AEW02854.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastel
SCNpilot_solid_1_scaffold_109_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14969..15559
DNA (591bp) protein (197aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagac
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIK0_NIAKG
ribosomal large subunit pseudouridine synthase E
SCNpilot_solid_1_scaffold_109_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15590..16465
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379A40C rbh
YicC-like domain-containing protein
YicC-like domain-containing protein {ECO:0000313|EMBL:AEW02852.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella
SCNpilot_solid_1_scaffold_109_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16476..16973
DNA (498bp) protein (166aa)
Protein involved in gliding motility GldH n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIJ8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO42866.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
gliding motility protein GldH
SCNpilot_solid_1_scaffold_109_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16973..17956
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A5D07 rbh
integral membrane sensor signal transduction histidine kinase Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
integral membrane sensor signal transduction histidine kinase
SCNpilot_solid_1_scaffold_109_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17963..18673
DNA (711bp) protein (237aa)
transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI00037C5C7A
two component transcriptional regulator, winged helix family Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
two component transcriptional regulator, winged helix family
SCNpilot_solid_1_scaffold_109_15
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18796..19335)
DNA (540bp) protein (180aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Flavobacterium sp. CF136 RepID=J3C7A7_9FLAO
Strain DSM 12611 Contig11, whole genome shotgun sequence {ECO:0000313|EMBL:KIO52063.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu
alkyl hydroperoxide reductase
SCNpilot_solid_1_scaffold_109_16
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20029..20418)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037D27B7
Contig102, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75440.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_solid_1_scaffold_109_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21279..23699
DNA (2421bp) protein (807aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH6_NIAKG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02516.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_109_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23867..24730
DNA (864bp) protein (288aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCG8_NIAKG
Membrane protein {ECO:0000313|EMBL:KIC94796.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solis
OmpA/MotB domain-containing protein
SCNpilot_solid_1_scaffold_109_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24928..25485
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJY4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02922.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_109_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25571..26662
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJY2_NIAKG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02920.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_109_21
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26954..27988
DNA (1035bp) protein (345aa)
Trehalose utilization n=1 Tax=Cecembia lonarensis LW9 RepID=K1KZ46_9BACT rbh
Trehalose utilization {ECO:0000313|EMBL:EKB49460.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein
SCNpilot_solid_1_scaffold_109_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28020..29003)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DD560 rbh
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU59654.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_solid_1_scaffold_109_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29242..30786)
DNA (1545bp) protein (515aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysyl-tRNA synthetase n=1 Tax=Segetibacter koreensis RepID=UPI00037D62D5
lysyl-tRNA synthetase
SCNpilot_solid_1_scaffold_109_24
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30848..31768)
DNA (921bp) protein (307aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQ54_SOLCM rbh
NAD dependent epimerase/dehydratase family protein
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AFD06222.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteri
SCNpilot_solid_1_scaffold_109_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31830..34508)
DNA (2679bp) protein (893aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373A34F rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02552.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
hypothetical protein
SCNpilot_solid_1_scaffold_109_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34767..35486
DNA (720bp) protein (240aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274, ECO:0000256|SAAS:SAAS00088448};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic a
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003668932 rbh
putative Baf family transcriptional acitvator
SCNpilot_solid_1_scaffold_109_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35464..36774
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003644115 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC91174.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_109_28
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36747..37442
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373F4FC
Uncharacterized protein {ECO:0000313|EMBL:GAO42069.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_109_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37459..38004)
DNA (546bp) protein (182aa)
Colicin V production protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THG5_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94785.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
colicin V production protein
SCNpilot_solid_1_scaffold_109_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38031..38483)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THG4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02810.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
Displaying items 1-30 of 90 in total

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