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SCNpilot_solid_1_scaffold_344

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_344_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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298..1314
DNA (1017bp) protein (339aa)
Transposase IS116/IS110/IS902 family protein n=2 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET17_AMOA5
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ACE05604.1}; Uncharacterized protein {ECO:0000313|EMBL:ACE06369.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagal
SCNpilot_solid_1_scaffold_344_2
Leptospira yanagawae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1400..2284)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523 RepID=R8ZWS1_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EOQ90375.1}; TaxID=1249483 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira yanagawae serovar Saopaulo str. Sa
SCNpilot_solid_1_scaffold_344_3
unknown

Not on your lists

comp(2525..2830)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_344_4
unknown

Not on your lists

3122..3391
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_344_5
unknown

Not on your lists

comp(3448..3612)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_344_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4849..7800
DNA (2952bp) protein (984aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinoph
DNA polymerase III, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL27_NIAKG
DNA polymerase III subunit alpha
SCNpilot_solid_1_scaffold_344_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7787..8935
DNA (1149bp) protein (383aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphi
DNA polymerase IV n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL26_NIAKG
DNA polymerase IV
SCNpilot_solid_1_scaffold_344_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9618..10613)
DNA (996bp) protein (332aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGK5_NIAKG
D-fructose 1,6-bisphosphatase
SCNpilot_solid_1_scaffold_344_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10848..11591)
DNA (744bp) protein (248aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO41052.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
SCNpilot_solid_1_scaffold_344_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11832..13625)
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003660D76
signal transduction histidine kinase Tax=RBG_13_Deltaproteobacteria_47_9_curated
putative signal transduction histidine kinase
SCNpilot_solid_1_scaffold_344_11
unknown

Not on your lists

comp(13882..14058)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_344_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14061..15566)
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364A3BC rbh
Serine protease {ECO:0000313|EMBL:KIC93317.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisi
protease Do
SCNpilot_solid_1_scaffold_344_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15811..16821)
DNA (1011bp) protein (337aa)
Acyl-CoA reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPA7_NIAKG
acyl-CoA reductase
Acyl-CoA reductase {ECO:0000313|EMBL:AEV96713.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strai
SCNpilot_solid_1_scaffold_344_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16898..17245
DNA (348bp) protein (116aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEF6_CHIPD
Ferredoxin {ECO:0000313|EMBL:KIC93316.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.
4Fe-4S ferredoxin
SCNpilot_solid_1_scaffold_344_15

Not on your lists

17398..17865
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA17725.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative uncharacterized protein id=2106258 bin=GWD2_Bacteroidetes_33_33 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
SCNpilot_solid_1_scaffold_344_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17974..18963
DNA (990bp) protein (330aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPB0_NIAKG rbh
D-alanine--D-alanine ligase
SCNpilot_solid_1_scaffold_344_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19039..19875
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000369BA59
Uncharacterized protein {ECO:0000313|EMBL:GAO45710.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
PASTA domain-containing protein
SCNpilot_solid_1_scaffold_344_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19904..20212
DNA (309bp) protein (103aa)
Rhodanese-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPB3_NIAKG
NADH oxidase {ECO:0000313|EMBL:KIC89373.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627
rhodanese-like protein
SCNpilot_solid_1_scaffold_344_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20660..22684
DNA (2025bp) protein (675aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEY3_NIAKG rbh
polysaccharide biosynthesis protein CapD rbh
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:AEW01571.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Nias
SCNpilot_solid_1_scaffold_344_20
unknown

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comp(22774..23325)
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_344_21
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23437..24855
DNA (1419bp) protein (473aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; N
Multi-sensor signal transduction histidine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NL05_9SPHI
histidine kinase
SCNpilot_solid_1_scaffold_344_22
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24976..25128)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BM52_9BACT
hypothetical protein Tax=GWA2_Bacteroidetes_31_9b_curated
hypothetical protein
SCNpilot_solid_1_scaffold_344_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25290..25643)
DNA (354bp) protein (118aa)
Response regulator receiver protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLT2_CHIPD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACU60369.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitin
SCNpilot_solid_1_scaffold_344_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26171..27589
DNA (1419bp) protein (473aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Niabella soli DSM 19437 RepID=H1NL03_9SPHI
chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AHF14355.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
SCNpilot_solid_1_scaffold_344_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27597..28040)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9T2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01276.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_344_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28081..28851
DNA (771bp) protein (257aa)
AMP nucleosidase; K01241 AMP nucleosidase [EC:3.2.2.4] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
AMP nucleosidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9T3_NIAKG
AMP nucleosidase
SCNpilot_solid_1_scaffold_344_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28859..30607
DNA (1749bp) protein (583aa)
Nickel-transporting ATPase., Sulfate-transporting ATPase {ECO:0000313|EMBL:AEW01298.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AEW01298.1};; EC=3.6.3.25 {ECO:0000313|EMBL:AEW01298.1};; TaxID=700598 species="Ba
Nickel-transporting ATPase., Sulfate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9V4_NIAKG
Nickel-transporting ATPase., Sulfate-transporting ATPase
SCNpilot_solid_1_scaffold_344_28
unknown

Not on your lists

30743..30871
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_344_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30846..31895
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9V1_NIAKG
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
SCNpilot_solid_1_scaffold_344_30
Leptospirillum ferrooxidans, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(32030..32704)
DNA (675bp) protein (225aa)
Putative OmpA family protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IQE7_LEPFC
OmpA family protein
Putative OmpA family protein {ECO:0000313|EMBL:BAM07496.1}; TaxID=1162668 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrooxidans (strain C
Displaying items 1-30 of 47 in total

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