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SCNpilot_solid_1_scaffold_381

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_381_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

278..3379
DNA (3102bp) protein (1034aa)
TonB-denpendent receptor n=1 Tax=Rudanella lutea RepID=UPI00035C0DE1 rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ADB37006.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma li
TonB-dependent receptor plug rbh
SCNpilot_solid_1_scaffold_381_2
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3391..4896
DNA (1506bp) protein (502aa)
carbohydrate-binding protein SusD n=1 Tax=Rudanella lutea RepID=UPI0003723165 rbh
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEI51834.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella
SCNpilot_solid_1_scaffold_381_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5190..5615)
DNA (426bp) protein (142aa)
Response regulator n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AMJ1_IGNAJ
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC94833.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="
response regulator
SCNpilot_solid_1_scaffold_381_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5837..6466)
DNA (630bp) protein (210aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIY2_NIAKG
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC94833.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="
two component transcriptional regulator, LuxR family
SCNpilot_solid_1_scaffold_381_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6488..8611)
DNA (2124bp) protein (708aa)
hypothetical protein Tax=RBG_16_Ignavibacteria_34_14_curated
Signal transduction histidine kinase id=4849137 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Signal transduction histidine kinase
SCNpilot_solid_1_scaffold_381_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8979..9626
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366615C
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AEW03522.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kore
SCNpilot_solid_1_scaffold_381_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9664..10281
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCR9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03523.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_381_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10340..10891)
DNA (552bp) protein (184aa)
UPF0301 protein Niako_7310 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS0_NIAKG
UPF0301 protein yqgE
UPF0301 protein Niako_7310 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kore
SCNpilot_solid_1_scaffold_381_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11126..12460
DNA (1335bp) protein (445aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B321B
integral membrane sensor signal transduction histidine kinase
SCNpilot_solid_1_scaffold_381_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12432..13679)
DNA (1248bp) protein (416aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003752AE5 rbh
Queuosine biosynthesis protein
SCNpilot_solid_1_scaffold_381_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14015..14473
DNA (459bp) protein (153aa)
Protein MraZ n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRD2_CHIPD
MraZ protein
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
SCNpilot_solid_1_scaffold_381_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14555..15463
DNA (909bp) protein (303aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS6_NIAKG
Ribosomal RNA small subunit methyltransferase H
SCNpilot_solid_1_scaffold_381_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15491..15832
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS7_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92527.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_381_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15886..18015
DNA (2130bp) protein (710aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEW03532.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEW03532.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chiti
Peptidoglycan glycosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS8_NIAKG rbh
peptidoglycan glycosyltransferase
SCNpilot_solid_1_scaffold_381_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18065..19531
DNA (1467bp) protein (489aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS9_NIAKG
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
SCNpilot_solid_1_scaffold_381_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19614..20933
DNA (1320bp) protein (440aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371F219
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
SCNpilot_solid_1_scaffold_381_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21048..22388
DNA (1341bp) protein (447aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCT1_NIAKG
UDP-N-acetylmuramoylalanine--D-glutamate ligase
SCNpilot_solid_1_scaffold_381_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22496..23707
DNA (1212bp) protein (404aa)
Cell cycle protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCT2_NIAKG
cell cycle protein
Cell cycle protein {ECO:0000313|EMBL:AEW03536.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strai
SCNpilot_solid_1_scaffold_381_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23716..24807
DNA (1092bp) protein (364aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCT3_NIAKG rbh
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
SCNpilot_solid_1_scaffold_381_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24818..26206
DNA (1389bp) protein (463aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCT4_NIAKG rbh
UDP-N-acetylmuramate--L-alanine ligase
SCNpilot_solid_1_scaffold_381_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26236..27075
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCT5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03539.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_381_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27086..28459
DNA (1374bp) protein (458aa)
Cell division protein ftsA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCT6_NIAKG
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
cell division protein FtsA
SCNpilot_solid_1_scaffold_381_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28556..30376
DNA (1821bp) protein (607aa)
Cell division protein FtsZ n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCT7_NIAKG
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Fla
cell division protein FtsZ
SCNpilot_solid_1_scaffold_381_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30537..31490
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCT8_NIAKG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03542.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_381_25
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31738..32451
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003783B18
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL66828.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain
SCNpilot_solid_1_scaffold_381_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32485..33639)
DNA (1155bp) protein (385aa)
Aminodeoxyfutalosine synthase {ECO:0000256|HAMAP-Rule:MF_00993}; Short=AFL synthase {ECO:0000256|HAMAP-Rule:MF_00993};; Short=Aminofutalosine synthase {ECO:0000256|HAMAP-Rule:MF_00993};; EC=2.5.1.120
Putative menaquinone biosynthesis protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH7_NIAKG rbh
putative menaquinone biosynthesis protein
SCNpilot_solid_1_scaffold_381_27
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33729..34892)
DNA (1164bp) protein (388aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3I1H6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EAZ79642.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis
hypothetical protein
SCNpilot_solid_1_scaffold_381_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35034..35282)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYV3_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:KIC96287.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_381_29
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35346..35684)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B8C9D
ferredoxin Tax=GWA2_Bacteroidetes_30_7_curated
ferredoxin
SCNpilot_solid_1_scaffold_381_30
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35911..36504)
DNA (594bp) protein (198aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NM69_9SPHI
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AHF14730.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella
Displaying items 1-30 of 36 in total

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