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SCNpilot_solid_1_scaffold_1196

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1196_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

249..3842
DNA (3594bp) protein (1198aa)
Acriflavin resistance protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV2_NIAKG rbh
Copper transporter {ECO:0000313|EMBL:KIC96044.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sol
acriflavin resistance protein
SCNpilot_solid_1_scaffold_1196_2
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3985..5265)
DNA (1281bp) protein (427aa)
Redoxin domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBL9_9SPHI
Redoxin domain protein {ECO:0000313|EMBL:CDS92098.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacte
hypothetical protein
SCNpilot_solid_1_scaffold_1196_3
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5493..5864
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2D4E8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EOZ91935.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
Helix-turn-helix protein
SCNpilot_solid_1_scaffold_1196_4
unknown

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comp(5906..6301)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1196_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6322..6603)
DNA (282bp) protein (94aa)
Helix-turn-helix domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGX4_CHIPD
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACU63525.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinopha
SCNpilot_solid_1_scaffold_1196_6
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6714..7298
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Sphingobacterium paucimobilis RepID=UPI0003B78FD8
RNA polymerase sigma-70 factor, expansion family 1
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:AGA77650.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echi
SCNpilot_solid_1_scaffold_1196_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7518..8711
DNA (1194bp) protein (398aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD57008.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
FecR protein id=3088682 bin=GWF2_Bacteroidetes_40_14 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
SCNpilot_solid_1_scaffold_1196_8
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8872..12414
DNA (3543bp) protein (1181aa)
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBM0_9SPHI
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ25091.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacte
TonB-dependent receptor
SCNpilot_solid_1_scaffold_1196_9
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12439..13806
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HR31_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ57937.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
hypothetical protein
SCNpilot_solid_1_scaffold_1196_10
unknown

Not on your lists

comp(13909..14259)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1196_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14729..15691)
DNA (963bp) protein (321aa)
Transcriptional regulator, AraC family n=2 Tax=Paenibacillus RepID=F5LNW5_9BACL
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAO44118.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;"
hypothetical protein
SCNpilot_solid_1_scaffold_1196_12
unknown

Not on your lists

15734..15889
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1196_13
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16202..17878
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PN50_CHIPD
Contig84, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75765.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
hypothetical protein
SCNpilot_solid_1_scaffold_1196_14
unknown

Not on your lists

17896..18222
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1196_15
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18514..18903
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JGJ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68001.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
SCNpilot_solid_1_scaffold_1196_16
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18985..19332)
DNA (348bp) protein (116aa)
DNA-binding protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JHA2_9BACT
DNA-binding protein {ECO:0000313|EMBL:ELR68195.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
DNA-binding protein
Displaying 16 items

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