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SCNpilot_solid_1_scaffold_1377

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1377_1
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(217..1422)
DNA (1206bp) protein (402aa)
Transposase IS4 family protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BU01_9FLAO rbh
Transposase IS4 family protein {ECO:0000313|EMBL:EHQ03815.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea D
hypothetical protein
SCNpilot_solid_1_scaffold_1377_2
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1677..3893
DNA (2217bp) protein (739aa)
ABC transporter related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1P0_9SPHI rbh
ABC transporter related protein {ECO:0000313|EMBL:EHQ24699.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Muc
ABC transporter related protein
SCNpilot_solid_1_scaffold_1377_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3883..5238
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00038282CD
Uncharacterized protein {ECO:0000313|EMBL:KIC89921.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_1377_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5446..5781)
DNA (336bp) protein (112aa)
IstB domain protein ATP-binding protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9X0_CHIPD
IstB domain-containing protein ATP-binding protein
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:ACU57545.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Ch
SCNpilot_solid_1_scaffold_1377_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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6128..6487
DNA (360bp) protein (120aa)
IS66 Orf2 family protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IXH4_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:CDH45989.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
IS66 Orf2 family protein
SCNpilot_solid_1_scaffold_1377_6
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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6607..8034
DNA (1428bp) protein (476aa)
Transposase {ECO:0000313|EMBL:CDH45975.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter oden
Transposase, IS66 family, Orf3 id=4252558 bin=GWF2_Bacteroidetes_42_66 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 rbh
Transposase
SCNpilot_solid_1_scaffold_1377_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8021..8464)
DNA (444bp) protein (148aa)
IstB domain protein ATP-binding protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9X0_CHIPD
IstB domain-containing protein ATP-binding protein
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:ACU57545.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Ch
SCNpilot_solid_1_scaffold_1377_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8503..9195)
DNA (693bp) protein (231aa)
Integrase catalytic region n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9W9_CHIPD
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ACU57544.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pi
SCNpilot_solid_1_scaffold_1377_9

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comp(9286..10137)
DNA (852bp) protein (284aa)
hypothetical protein n=2 Tax=Pedobacter arcticus RepID=UPI00036B8FA5
Marine sediment metagenome DNA, contig: S06H3_L01044 {ECO:0000313|EMBL:GAI16887.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transposase
SCNpilot_solid_1_scaffold_1377_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10221..10484)
DNA (264bp) protein (88aa)
transposase n=1 Tax=Erwinia carotovora RepID=UPI0001A44A78
Transposase {ECO:0000313|EMBL:KIC92918.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae
FIG01046424: hypothetical protein
SCNpilot_solid_1_scaffold_1377_11
unknown

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comp(11086..12051)
DNA (966bp) protein (322aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1377_12
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12064..13551)
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003658FA9 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDS92805.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
prophage pi2 protein
SCNpilot_solid_1_scaffold_1377_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13567..14583)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1N4_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24693.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mu
hypothetical protein
SCNpilot_solid_1_scaffold_1377_14
unknown

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comp(14605..14817)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1377_15
unknown

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comp(14946..15170)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1377_16
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15222..16250
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DQA3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP96611.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
hypothetical protein
SCNpilot_solid_1_scaffold_1377_17
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16415..17308)
DNA (894bp) protein (298aa)
choline kinase n=1 Tax=Fusobacterium russii RepID=UPI0003AA27B6
Uncharacterized protein {ECO:0000313|EMBL:EQB88416.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
choline/ethanolamine kinase family protein
Displaying 17 items

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