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SCNpilot_solid_1_scaffold_1645

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1645_1
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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186..752
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003797D74
CarD family transcriptional regulator {ECO:0000313|EMBL:KEO72661.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
SCNpilot_solid_1_scaffold_1645_2
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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806..1315
DNA (510bp) protein (170aa)
membrane protein n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255AF4A
Membrane protein {ECO:0000313|EMBL:KJD36856.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
hypothetical protein
SCNpilot_solid_1_scaffold_1645_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1564..5097
DNA (3534bp) protein (1178aa)
Signal transduction histidine kinase, LytS n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVW4_DYAFD rbh
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO41421.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source
signal transduction histidine kinase LytS
SCNpilot_solid_1_scaffold_1645_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5110..5859
DNA (750bp) protein (250aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W647_DYAFD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACT92527.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyad
SCNpilot_solid_1_scaffold_1645_5
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6205..7929)
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037323CD rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA85905.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
SCNpilot_solid_1_scaffold_1645_6
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(9135..9524)
DNA (390bp) protein (130aa)
Transposase n=1 Tax=planctomycete KSU-1 RepID=I3ILZ4_9PLAN
transposase IS200-family protein Tax=CG_Ignavi_01
transposase IS200-family protein
SCNpilot_solid_1_scaffold_1645_7
unknown

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comp(9846..10094)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1645_8

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comp(10412..11989)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D39B9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN84084.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_solid_1_scaffold_1645_9
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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12166..13836
DNA (1671bp) protein (557aa)
Putative uncharacterized protein id=3941258 bin=GWC2_Clostridiales_40_7 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute rbh
Putative uncharacterized protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
SCNpilot_solid_1_scaffold_1645_10
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(14205..14978)
DNA (774bp) protein (258aa)
Methyltransferase type 11 n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RUT9_METFO rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EKF86545.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobac
methylase involved in ubiquinone/menaquinone biosynthesis
SCNpilot_solid_1_scaffold_1645_11
Bacillus sp. JCM 19045, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(15196..15765)
DNA (570bp) protein (190aa)
Uncharacterized protein n=2 Tax=Bacillus cereus RepID=J8SHE8_BACCE
Uncharacterized protein {ECO:0000313|EMBL:GAF11472.1}; TaxID=1460639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. JCM 19045.;"
integrase
Displaying 11 items

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