ggKbase home page

SCNpilot_solid_1_scaffold_855_29

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(34234..34926)

Top 3 Functional Annotations

Value Algorithm Source
regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B59DB2 similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 230.0
  • Bit_score: 275
  • Evalue 4.70e-71
Two-component response regulator {ECO:0000313|EMBL:EDM35474.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobact similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 226.0
  • Bit_score: 274
  • Evalue 1.10e-70
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 223.0
  • Bit_score: 269
  • Evalue 9.50e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 693
ATGCTTCACACTATCGCCATAGACGATGAACCCATTGCACTGGAAGTGGTTAAATCGCTTTCAGCAAAAGTGCCTTTTGTAGATTTACAGGCTTGCTTTACCAATGCTTTTGAAGCACTTGCCTATTTACAGCAACAAAAAACAGACCTGATCTTCTTAGATATTAAGATGCCGGACATCAGCGGCATTGACTGGCTGAAATCAGTTGTGCAGCCTCCTATGGTAATTTTTACTACCGCCTATAGCGAACATGCTGTAGAAAGCTTCGAGCTGGATGCGGTTGATTATCTTTTAAAACCATTTTCACTTGCCCGTTTTTTAAAAGCAACCAATAAGGCCAATGAATTGTACCGGTTAAAATCTTCCGCTTCCGTTCAGGAAGTCAACCCTGATCATGTATTTATAAAAAGCGGTTACGAGCAGATCAGGATAGACTTTGATGATATCGTATACCTGCAGAGTGCGGGAAATTATGTTCACTTTATTCTTGCTGAAAATAAAATACTTTCCAGGCTTACCATGAATGAAGTAGAAGCCTTGCTTCCTGCTGCTCTATTTACCCGTATTCATCGCTCCTATATTGTTGCCAATAACAAAATTACCCGCATGGATAAATACAATATCCGGATAGATGATATTTGCCTGCCGGTAGGCCCGGGTTACAGTACGGCATTGGAGCAAATGGTAAAGTGA
PROTEIN sequence
Length: 231
MLHTIAIDDEPIALEVVKSLSAKVPFVDLQACFTNAFEALAYLQQQKTDLIFLDIKMPDISGIDWLKSVVQPPMVIFTTAYSEHAVESFELDAVDYLLKPFSLARFLKATNKANELYRLKSSASVQEVNPDHVFIKSGYEQIRIDFDDIVYLQSAGNYVHFILAENKILSRLTMNEVEALLPAALFTRIHRSYIVANNKITRMDKYNIRIDDICLPVGPGYSTALEQMVK*