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SCNpilot_solid_1_scaffold_855

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_855_1
CG_Bacteroid_01, Bacteroidetes, Bacteria

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1..219
DNA (219bp) protein (73aa)
transposase IS4 family protein Tax=CG_Bacteroid_01
Transposase IS4 family protein id=4361163 bin=GWF2_Bacteroidetes_41_9 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
SCNpilot_solid_1_scaffold_855_2
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(168..1328)
DNA (1161bp) protein (387aa)
Sialidase {ECO:0000313|EMBL:EON77291.1}; EC=3.2.1.18 {ECO:0000313|EMBL:EON77291.1};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobact
Uncharacterized protein id=3113023 bin=GWF2_Bacteroidetes_41_9 species=Bacteroides ovatus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_solid_1_scaffold_855_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1443..2021
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R3_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
SCNpilot_solid_1_scaffold_855_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2131..3315
DNA (1185bp) protein (395aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC95908.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
FecR protein id=2885643 bin=GWF2_Bacteroidetes_40_14 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
anti-FecI sigma factor FecR
SCNpilot_solid_1_scaffold_855_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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3434..7018
DNA (3585bp) protein (1195aa)
TonB-dependent receptor plug Tax=GWE2_Bacteroidetes_42_39_curated
SusC/RagA family TonB-linked outer membrane protein id=1840777 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + rbh
TonB-dependent receptor plug
SCNpilot_solid_1_scaffold_855_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7048..8763
DNA (1716bp) protein (572aa)
Uncharacterized protein id=1840778 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + rbh
RagB/SusD domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
RagB/SusD domain-containing protein
SCNpilot_solid_1_scaffold_855_7
unknown

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comp(8855..8968)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_855_8
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8984..10141
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZMQ5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EON75294.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
hypothetical protein
SCNpilot_solid_1_scaffold_855_9
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10234..11313
DNA (1080bp) protein (360aa)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ADZ79396.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ADZ79396.1};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphing
Quinoprotein glucose dehydrogenase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3K8_SPHS2
quinoprotein glucose dehydrogenase
SCNpilot_solid_1_scaffold_855_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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11357..12373
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374F9D4
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACT92521.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans
SCNpilot_solid_1_scaffold_855_11
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12387..13454
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUQ2_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03902.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
SCNpilot_solid_1_scaffold_855_12
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13496..15637
DNA (2142bp) protein (714aa)
pyrrolo-quinoline quinone n=1 Tax=Cytophagales str. B6 RepID=UPI0003B39E1C
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:AHM60495.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="F
pyrrolo-quinoline quinone
SCNpilot_solid_1_scaffold_855_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15727..16251)
DNA (525bp) protein (175aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCE6_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW01453.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
SCNpilot_solid_1_scaffold_855_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16602..17642
DNA (1041bp) protein (347aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCE5_NIAKG
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW01452.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
SCNpilot_solid_1_scaffold_855_15
unknown

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17664..17984
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_855_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18068..20845
DNA (2778bp) protein (926aa)
TonB-dependent receptor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM70_NIAKG rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEV99843.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_855_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20866..22401
DNA (1536bp) protein (512aa)
RagB/SusD domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM69_NIAKG rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEV99842.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella
SCNpilot_solid_1_scaffold_855_18
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22413..23936
DNA (1524bp) protein (508aa)
type I phosphodiesterase (EC:3.-.-.-)
Type I phosphodiesterase {ECO:0000313|EMBL:CAZ95055.1}; EC=3.-.-.- {ECO:0000313|EMBL:CAZ95055.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zo
Type I phosphodiesterase n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L2L2_ZOBGA
SCNpilot_solid_1_scaffold_855_19
Nitritalea halalkaliphila, Nitritalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24098..24823
DNA (726bp) protein (242aa)
phenylalanine 4-hydroxylase (EC:1.14.16.1)
phenylalanine-4-hydroxylase n=1 Tax=Dyadobacter beijingensis RepID=UPI000376AB71
Phenylalanine 4-hydroxylase {ECO:0000313|EMBL:EIM73436.1}; TaxID=1189621 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Nitritalea.;" source="Nitritalea halalkaliphila
SCNpilot_solid_1_scaffold_855_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24967..25104
DNA (138bp) protein (46aa)
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:AHF14960.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella s
SCNpilot_solid_1_scaffold_855_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25158..25946
DNA (789bp) protein (263aa)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Niabella aurantiaca RepID=UPI000362B42D
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KIC89944.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Fl
4-hydroxyphenylpyruvate dioxygenase
SCNpilot_solid_1_scaffold_855_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25966..27123
DNA (1158bp) protein (386aa)
Homogentisate 12-dioxygenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPN5_9SPHI
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:KIC93392.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihum
homogentisate 1,2-dioxygenase
SCNpilot_solid_1_scaffold_855_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27136..28137
DNA (1002bp) protein (334aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG14_CHIPD
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ACU57997.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitin
SCNpilot_solid_1_scaffold_855_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28118..28996
DNA (879bp) protein (293aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD8_NIAKG
flavin reductase domain-containing FMN-binding protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
flavin reductase domain-containing FMN-binding protein
SCNpilot_solid_1_scaffold_855_25
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29080..30720
DNA (1641bp) protein (547aa)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J0Y9_9SPHI
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
phosphoenolpyruvate carboxykinase
SCNpilot_solid_1_scaffold_855_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30791..31168)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNE1_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17528.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
SCNpilot_solid_1_scaffold_855_trna_2
unknown

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comp(31644..31727)
DNA (84bp)
transferRNA
SCNpilot_solid_1_scaffold_855_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31891..33090
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003625391
alanine dehydrogenase
Alanine dehydrogenase {ECO:0000313|EMBL:AHF15275.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.
SCNpilot_solid_1_scaffold_855_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33174..33887)
DNA (714bp) protein (238aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDC3_NIAKG
methyltransferase small
SCNpilot_solid_1_scaffold_855_29
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34234..34926)
DNA (693bp) protein (231aa)
regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B59DB2
Two-component response regulator {ECO:0000313|EMBL:EDM35474.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobact
response regulator receiver
Displaying items 1-30 of 36 in total

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