ggKbase home page

SCNpilot_solid_2_scaffold_42_28

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(32291..32941)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6T0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 216.0
  • Bit_score: 353
  • Evalue 1.30e-94
  • rbh
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFI50940.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 216.0
  • Bit_score: 353
  • Evalue 1.80e-94
two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 207.0
  • Bit_score: 128
  • Evalue 3.60e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGTGTTGCGTTCGGGTCGTTATTGCAAATCGTAACCCGGTGATTTCGCAGAACCTCGCCAATCTTCTGCGCGCTGAAGGCAATTTCGAAGTCGTTGCGAGTTGCTTCACCATTTCCGAATGCGTCGAACTCGTCCGGGCCCAATCCCCTAACATCGCGATCATCGAACGCTTGATGTCCAGCAGGATACCGGGACAGGACATTCTTGCGGCGGTCGCATCGGCCTGCTTTTTTACTCGCGTGGTTTTTCTCGCAGCATCATACGAGCCCGACGACACATCCGCCATCACCACCCATGAATTACCTCTCAAGGGATCCACGGTGGCGCGATGCCTGACTCAGATCGTCACCGGTCATTTACCTGCGCCACCGACCTTCAACCCGAAGACCGTTTCACGACATCAGGCCAAGCCGGCCCGCGTCGAGACACCGGGTCAGCAGCCCGCATATTTGACCGAACGCGAACGTGAGATCATGCAAGAGGTATCCGAAGGCATTTCAAATAAAGAAGCCGCCCGCCGGCTGAACATTTCCGAAGGCACCATCAAGCTTCACCTGCATCACATTTATCACAAGCTCTCCATCAAGAACCGTGCCGAGCTTGTTGCGATGGCGACCCTGCATTCAGGGCCAGCCTGGCTCGTGGTCTGA
PROTEIN sequence
Length: 217
MCCVRVVIANRNPVISQNLANLLRAEGNFEVVASCFTISECVELVRAQSPNIAIIERLMSSRIPGQDILAAVASACFFTRVVFLAASYEPDDTSAITTHELPLKGSTVARCLTQIVTGHLPAPPTFNPKTVSRHQAKPARVETPGQQPAYLTEREREIMQEVSEGISNKEAARRLNISEGTIKLHLHHIYHKLSIKNRAELVAMATLHSGPAWLVV*