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SCNpilot_solid_2_scaffold_42_29

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 33432..34205

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6T1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 246.0
  • Bit_score: 434
  • Evalue 6.80e-119
  • rbh
Nitrate/nitrite response regulator protein NarL {ECO:0000313|EMBL:CEG09607.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afip similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 246.0
  • Bit_score: 434
  • Evalue 9.50e-119
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 247.0
  • Bit_score: 183
  • Evalue 6.60e-44

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGGAGTTGAACATGCGTGCGACCGTCATTGTTGGATCGAACAATCTTTTCCGCGAAGGCCTTATTCGTATTCTCGGAGCCGCGGATTTCAATGTCCTGGATGCAATCACGTGGATCGACGATGCTGTTCTGGACGCGATGGTGGCGCACGATTGCGCCCTGTTCATTCTAGATGCCGGTAATGGCTCGAATGCCGTGCTTGATCAAATCAAGCTCATCAAAACGCGGAATCCGATGTGGCGCGTCGTGGTGCTGGATAACAGCAACCAGTTGATCAATATCGCATCGGTTTATCGTGCGGGCGTCAGCGCTTACCTGGCCAACGTTGCAACATCGGTTGCTTTCATCAAATTTCTGGAACTGGTGATGCTGGGTGAGACGATTTTGCCGGCCGCGTTTCTCCCATTCGTGCTTGATCAGGCCGGCGATGAGAATGGCACGAATTCCCACGTGGTAGGGAGCGAATGCAAGAATGATCTGGAACAGCAACTCATCGCAGCGGTCGGCGGCGCGCCGATGCCGCAGCTGTCGTTGCGGGAAAAAGTGGTCTTGCGCTGTATCATTGAGGGTGGATCGAACAAGATGATCGCGCGGAAAATCGCTATTTCGGAAGCGACCGTGAAAGTTCACGTCAAGTCGATCCTTCGCAAGATCCGCGTCCATAGCCGCACGCAGGCAGCTATCTGGGGAATAAACAGCGGCTTCTCCCTTTGCCAGATCGAGGGCGACACGATCGTCCCATCTTCGATTTTCCCAGGTTCTCTGATTGGATAA
PROTEIN sequence
Length: 258
MELNMRATVIVGSNNLFREGLIRILGAADFNVLDAITWIDDAVLDAMVAHDCALFILDAGNGSNAVLDQIKLIKTRNPMWRVVVLDNSNQLINIASVYRAGVSAYLANVATSVAFIKFLELVMLGETILPAAFLPFVLDQAGDENGTNSHVVGSECKNDLEQQLIAAVGGAPMPQLSLREKVVLRCIIEGGSNKMIARKIAISEATVKVHVKSILRKIRVHSRTQAAIWGINSGFSLCQIEGDTIVPSSIFPGSLIG*