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SCNpilot_solid_2_scaffold_172_7

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(8590..10356)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DC0C43 similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 586.0
  • Bit_score: 1049
  • Evalue 0.0
  • rbh
Choline dehydrogenase-like protein {ECO:0000313|EMBL:EIJ44480.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herb similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 588.0
  • Bit_score: 921
  • Evalue 5.90e-265
betA; choline dehydrogenase-like protein similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 586.0
  • Bit_score: 908
  • Evalue 1.50e-261
  • rbh

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Taxonomy

Herbaspirillum sp. GW103 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1767
ATGTCTATTATCAATGATGCGGTCGATGTAGTTATCGTTGGACTTGGCTGGACCGGCTCGATCATGAGCATCGAGCTGGCTAACGCGGGTTTGAAGGTGCGCGCGCTGGAAAGCGGCCCGGAGCGCACCAATGCCGAATACATCTATCCGAAGCCGGCGGACCAGCTCAGCTATTCGATTCGTCAAAAGGTTTTTGCCAGGGCGAGCCATGCCGCACTCACGGTGCGTCATGACCGGAGTCAGACGGCGCTTCCGACGCGCCGCTGGGGCGCCTTCAAACCCGGCGACGGCGTCGGTGGCGCGGGTGTGCACTGGACGGCGGTCCTGATCCGGCCGACGCCGATTGATCTGAAACTCAAGACTTTCGTCGATCAGGCCTACAAGCCCGGCCAATTGCAGGACGATCTGCAGATTCAGGATTTCCCCGTCAGCTACGACGAACTCGAGCCGCATTTTGATTTCTTTGAGAAGGTTTGTGGTGCTTCCGGAGCGGCAGGAAACCTGCGTGGCAAGATCCAGGAGGGCGGCGATCCTTTCGAGGGGCCGCGCTCCAATCCCTATCCGCTACCGCCGTTGCAGGACACGCTGAACAACACAATGTTCGCAAGCGTGGCCAAGAAGATGGGCTACCATCCCTTTCCAAATCCTTCAGCAGCAGCCTCCGGCCCGTGGACCAATCCCTACGGCGTACAGATTGCGCCGTGTAACTATTGTGGGTTTTGCAGCGACTATTTCTGCCTCAACTACTCGAAGGCATCGCCACAGACGACGATTCTCGACGCGGTCAAACGGATGCCGAACTTTTCCTACCGGACGAATGCACATGTCATCCGTGTCGATATGCATGACGACCGTAAGACTGCAAAGGGTGTCACCTATATCGATGAGCAGGAGCAGGAGGTTTTCCAGCCAGCGAGCATCGTTATTCTGGCCAGCTTCCAGTTCAACAACGTTCGGTTTATGCTGCAGTCGGGCATCGGCAAGCCTTATGATCCGGTAACGGGCGAGGGTGTGGTCGGTCGCAACTACGCATTCCTGAGCAACGGCAATGCGACGCTTTTCTTCAAGGACAAGAACTTCAATCCCTTCGTTGCAGCTGGTCCGACAGGCCAGATGATCAATGACTTCTCGCCTGGCACATTCGACGCGGCGCCCTACGGATTTATCGGCGGAGCCAAGCTTCACTCGTCACAGGCAGGTGGCGCGCCCATCGGCATGGCCCTGCCGGGCGGTACCCCGAAATGGGGAGCCGGTTGGAAGAAGGGGATCAAGGATTGGTACGGCCACTCCATGAAGGTCAGCATTACGACGACCTGCATGTCCTACCGCGACAATTATCTCGACCTCGATCCCACCTACAAAGATCCCTATGGTCAGCCATTGTTGCGAATGACCTTCGACTGGAAACAGAACGAATTGAAGTTGCAGCAATTTCTGCGAGAAAGAGTGCTGGAAATTGTCAAGGAGCTTGGTCCCGATAGTCATACGGAAAACTTCCTGAAGCCCGACTCGCATTGGGATACGAGGTCTTACGTCTCCACGCATAATGTCGGCGGTGCGGTCATGGGCGACACGCCCAAGGATTCCGCGATCAACCGCTACATGCAGAGCTGGGACGCTCACAACGTGTTTGTTCCAGGCGGCAATGCCTTCCCGCAGAACTTCCAGGCCAATCCCACCGACATGATCGGTGCGCTCACCTATTATTCGGTGAAAGCCATCACGGAGAAATATATCAGGCAGCCCGGCCCGCTGGTGGCAATTTAA
PROTEIN sequence
Length: 589
MSIINDAVDVVIVGLGWTGSIMSIELANAGLKVRALESGPERTNAEYIYPKPADQLSYSIRQKVFARASHAALTVRHDRSQTALPTRRWGAFKPGDGVGGAGVHWTAVLIRPTPIDLKLKTFVDQAYKPGQLQDDLQIQDFPVSYDELEPHFDFFEKVCGASGAAGNLRGKIQEGGDPFEGPRSNPYPLPPLQDTLNNTMFASVAKKMGYHPFPNPSAAASGPWTNPYGVQIAPCNYCGFCSDYFCLNYSKASPQTTILDAVKRMPNFSYRTNAHVIRVDMHDDRKTAKGVTYIDEQEQEVFQPASIVILASFQFNNVRFMLQSGIGKPYDPVTGEGVVGRNYAFLSNGNATLFFKDKNFNPFVAAGPTGQMINDFSPGTFDAAPYGFIGGAKLHSSQAGGAPIGMALPGGTPKWGAGWKKGIKDWYGHSMKVSITTTCMSYRDNYLDLDPTYKDPYGQPLLRMTFDWKQNELKLQQFLRERVLEIVKELGPDSHTENFLKPDSHWDTRSYVSTHNVGGAVMGDTPKDSAINRYMQSWDAHNVFVPGGNAFPQNFQANPTDMIGALTYYSVKAITEKYIRQPGPLVAI*