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SCNpilot_solid_2_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_172_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241..588)
DNA (348bp) protein (116aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
panD; aspartate alpha-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
Aspartate 1-decarboxylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q4_9BRAD
SCNpilot_solid_2_scaffold_172_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1107..2144
DNA (1038bp) protein (346aa)
nitrilase; K01502 aliphatic nitrilase [EC:3.5.5.7]
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V749_9BRAD rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:EFI51059.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
SCNpilot_solid_2_scaffold_172_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2549..5689)
DNA (3141bp) protein (1047aa)
Hydrophobe/amphiphile efflux-1 HAE1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPK4_NITHX rbh
Hydrophobe/amphiphile efflux-1 HAE1 {ECO:0000313|EMBL:ABE61843.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;
hydrophobe/amphiphile efflux-1 HAE1 rbh
SCNpilot_solid_2_scaffold_172_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5694..6842)
DNA (1149bp) protein (383aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPK5_NITHX rbh
secretion protein HlyD rbh
Secretion protein HlyD {ECO:0000313|EMBL:ABE61842.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nit
SCNpilot_solid_2_scaffold_172_5
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7287..8246)
DNA (960bp) protein (320aa)
gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E93702 rbh
Membrane-bound D-gluconate 2-dehydrogenase cytochrome c subunit {ECO:0000313|EMBL:EIJ44481.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; H
SCNpilot_solid_2_scaffold_172_6
unknown

Not on your lists

8330..8533
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_172_7
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8590..10356)
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DC0C43 rbh
Choline dehydrogenase-like protein {ECO:0000313|EMBL:EIJ44480.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herb
betA; choline dehydrogenase-like protein rbh
SCNpilot_solid_2_scaffold_172_8
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10415..11140)
DNA (726bp) protein (242aa)
gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3); K06152 gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
Gluconate 2-dehydrogenase (Acceptor) n=2 Tax=Rahnella RepID=E8Y169_RAHSY
Gluconate 2-dehydrogenase {ECO:0000313|EMBL:KKB61717.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andr
SCNpilot_solid_2_scaffold_172_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11673..12620)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUZ9_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31240.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain-containing protein 1
SCNpilot_solid_2_scaffold_172_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12617..13741)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS31_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31239.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
mandelate racemase/muconate lactonizing protein rbh
SCNpilot_solid_2_scaffold_172_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13775..15478)
DNA (1704bp) protein (568aa)
dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYK3_AFIFE rbh
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:EKS31238.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690
SCNpilot_solid_2_scaffold_172_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15506..16435)
DNA (930bp) protein (310aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLQ6_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31237.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_172_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16441..17172)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ56_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31236.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_172_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17187..17966)
DNA (780bp) protein (260aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUZ4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31235.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_172_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17973..18953)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS27_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31234.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
glycerate dehydrogenase
SCNpilot_solid_2_scaffold_172_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18963..19691)
DNA (729bp) protein (243aa)
glutamate/aspartate transport ATP-binding protein; K10004 glutamate/aspartate transport system ATP-binding protein [EC:3.6.3.-]
Glutamate/aspartate transport ATP-binding protein GltL n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYJ2_AFIFE rbh
Glutamate/aspartate transport ATP-binding protein GltL {ECO:0000313|EMBL:EKS31233.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sou
SCNpilot_solid_2_scaffold_172_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19688..20341)
DNA (654bp) protein (218aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLP4_AFIFE rbh
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EKS31232.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia
gltK; glutamate/aspartate ABC transporter permease; K10002 glutamate/aspartate transport system permease protein
SCNpilot_solid_2_scaffold_172_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20341..21063)
DNA (723bp) protein (241aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ42_AFIFE rbh
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EKS31231.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia
gltJ; glutamate/aspartate ABC transporter permease; K10003 glutamate/aspartate transport system permease protein
SCNpilot_solid_2_scaffold_172_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21105..21983)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUY0_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31230.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
gltI; glutamate/aspartate periplasmic-binding protein GltI; K10001 glutamate/aspartate transport system substrate-binding protein
SCNpilot_solid_2_scaffold_172_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22228..22908
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS13_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31229.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
GntR family transcriptional regulator
SCNpilot_solid_2_scaffold_172_21
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22881..24536)
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037F6CB1
Uncharacterized protein {ECO:0000313|EMBL:CCW17418.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein
SCNpilot_solid_2_scaffold_172_22
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24731..26371)
DNA (1641bp) protein (547aa)
Na+/H+ antiporter n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJJ6_BEII9 rbh
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family
Na+/H+ antiporter {ECO:0000313|EMBL:ACB94870.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp.
SCNpilot_solid_2_scaffold_172_23
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(26599..26880)
DNA (282bp) protein (94aa)
Zn-finger-containing protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZB93_TERRK
Zn-finger-containing protein
Tax=RBG_16_Spirochaete_67_19_curated
SCNpilot_solid_2_scaffold_172_24
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26880..28541)
DNA (1662bp) protein (554aa)
thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:ACZ86936.1}; EC=1.8.1.9 {ECO:0000313|EMBL:ACZ86936.1};; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Str
Thioredoxin-disulfide reductase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AWE0_STRRD rbh
SCNpilot_solid_2_scaffold_172_25
unknown

Not on your lists

comp(28625..29113)
DNA (489bp) protein (163aa)
thioredoxin 2 (EC:1.8.1.8); K03672 thioredoxin 2 [EC:1.8.1.8]
Thioredoxin 2 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICY3_9SPHN
Thioredoxin C-3 {ECO:0000313|EMBL:CPR20134.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_solid_2_scaffold_172_26
unknown

Not on your lists

29162..29302
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_172_27
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29362..30978
DNA (1617bp) protein (539aa)
Transmembrane transport protein (DitE-like protein) n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT24_METAC rbh
Enterobactin exporter EntS {ECO:0000313|EMBL:CEG07023.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
transmembrane transport protein (DitE homolog) rbh
SCNpilot_solid_2_scaffold_172_28
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31337..31894)
DNA (558bp) protein (186aa)
ACP phosphodiesterase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GBS5_9BURK
ACP phosphodiesterase {ECO:0000313|EMBL:ESH90743.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(
NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase
SCNpilot_solid_2_scaffold_172_29
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32437..33699
DNA (1263bp) protein (421aa)
peptidase M20D, amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKU5_AFIFE rbh
Amidohydrolase {ECO:0000313|EMBL:EKS30942.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_172_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33818..34483
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NP83_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30941.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
Displaying items 1-30 of 100 in total

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