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SCNpilot_solid_2_scaffold_172_39

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 40853..41746

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I333_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 295.0
  • Bit_score: 430
  • Evalue 1.90e-117
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 295.0
  • Bit_score: 430
  • Evalue 6.10e-118
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADP70327.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rho similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 295.0
  • Bit_score: 430
  • Evalue 2.70e-117

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Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCATCGGAACGAGTTTGGAGATCTCGCCGCGTTTGTGGCGGTTGCCGAGGAGCGAAGTTTCACGCGGGCGGCAGCGCGGATCGGGACGTCGCAATCCGCGCTGAGTTACACCGTGCGGCGGCTCGAAGAACGGCTCGGCATCCGGTTGCTCGCTCGGACCACCCGCAATATTGCCCTCACCGAGGCCGGCACGAAGTTGCTTGCGAAATTAAAGCCCGCCTTCGAGGACGTCCGGCACAGCCTCGAGTCGTTGGATGAACTGCGCGAGAAGCCGGCCGGCACGATCCGCATCACCTCAAGCCGGAGTCCCGCCGACCTGATCCTCATGCCGATCGTTGGCAAACTCTTGACGGAGTACCCCGACCTCCACATCGAAATCTCGGTCGACCAGAAACTGACGGACATTGTCGGCGAAGGCTTTGATGCAGGTATCCGCCTCGGGGAACAGATCGAGAAGGACATGATCGCGGTACGCATCTCGCCGGACCTTCAAATGACGGTCGTCGGATCACCTGGCTATTTCAAACGCCGCGGGAAGCCGAAGACGCCGCAAGACCTGACCAAACACACCTGCATCAACCTGCGCTTGCCGACGAAAGGCGGCCTTTATTCCTGGGAATTCGAGAAGAAGGGCAGACCGCTGAATGTCAGGGTCGAGGGGCAGTTTACCTGCAACGACGTTCCGATGATCGTCGACGCTGCGTCAAGCGGGCTTGGCCTCGCCTGCCTGCCAAACGATACGGTGCAACAGGCATTGGATGATGGCCGTCTTGTCAGGGTGCTTGAGGATTGGTGCCCGTCATTCCCCGGTTATCATCTCTACTATCCAAGCCGCCGTCAGAACTCGCTGGCCTTCAATCTTCTCGTCGATGCGCTACGCTCACGAAGATAG
PROTEIN sequence
Length: 298
MHRNEFGDLAAFVAVAEERSFTRAAARIGTSQSALSYTVRRLEERLGIRLLARTTRNIALTEAGTKLLAKLKPAFEDVRHSLESLDELREKPAGTIRITSSRSPADLILMPIVGKLLTEYPDLHIEISVDQKLTDIVGEGFDAGIRLGEQIEKDMIAVRISPDLQMTVVGSPGYFKRRGKPKTPQDLTKHTCINLRLPTKGGLYSWEFEKKGRPLNVRVEGQFTCNDVPMIVDAASSGLGLACLPNDTVQQALDDGRLVRVLEDWCPSFPGYHLYYPSRRQNSLAFNLLVDALRSRR*