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SCNpilot_solid_2_scaffold_172_79

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 78580..79005

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 132.0
  • Bit_score: 241
  • Evalue 4.60e-61
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:CEG09185.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 132.0
  • Bit_score: 241
  • Evalue 6.50e-61
signal receiver domain protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 131.0
  • Bit_score: 218
  • Evalue 1.70e-54

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGCATCTCTGCGTCGACGGTTCAATCATGTCCTCCCTGCGCAAAAGCACCGTGTATGTCATCGACGACGACCCGGACGTTCTGGGCTCGCTGCGCTTTCTGCTGGAGGCTGAAGGATTTGAAACCCTGACGTTCCGCACGGCTTCCGCAGCGCTGGAGACGGGCGTACCGCGCCACGCCGACTGTTTTATCATCGACTACAAGATGCCCGGTATGAACGGCCTCGATCTTGTCTGCCGCCTCCACAGCCAGAATATGCGGGTGCCGATGATCCTGATAACCGGCGATCCCGACGAAGCCATCGCCGCGAAGGCGATGGCCGCCGGTGTCCATTACGTGCTTCGCAAGCCGCACTTGGAGGAAAGCTTGATCGCCCATATCCGGCAGGCGATGCAGGACGATACCCCGGCGGCACGCCCTTCCTGA
PROTEIN sequence
Length: 142
MHLCVDGSIMSSLRKSTVYVIDDDPDVLGSLRFLLEAEGFETLTFRTASAALETGVPRHADCFIIDYKMPGMNGLDLVCRLHSQNMRVPMILITGDPDEAIAAKAMAAGVHYVLRKPHLEESLIAHIRQAMQDDTPAARPS*