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SCNpilot_solid_2_scaffold_502_33

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 41396..41695

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAE2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 193
  • Evalue 7.80e-47
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 193
  • Evalue 1.10e-46
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 188
  • Evalue 7.90e-46

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGAGCACTCAGGACTCGCGCCATTACGACATCATCGTCGCTCCGGTGATCACCGAGAAGGCGACGGCTGCGTCCGAGCACAACAAGGTTGTGTTCAAGGTTGCCGCGAAGGCGACCAAGCCGCAGATCAAGGAGGCGGTTGAGAAGCTGTTCGACGTCAAGGTGAAGGGCGTCAATACGCTGGTCCGCAAGGGCAAGACCAAGGTCTTCCGCGGCCAGTTCGGCTCTCAGTCGGATACCAAGCGCGCTGTTGTGACCCTCGAAGAGGGCCATCGCATCGACGTGACCACCGGACTGTAA
PROTEIN sequence
Length: 100
MSTQDSRHYDIIVAPVITEKATAASEHNKVVFKVAAKATKPQIKEAVEKLFDVKVKGVNTLVRKGKTKVFRGQFGSQSDTKRAVVTLEEGHRIDVTTGL*