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SCNpilot_solid_2_scaffold_502

Search features with annotation key words

Displaying items 31-60 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_502_29
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38432..39649
DNA (1218bp) protein (406aa)
Elongation factor Tu n=2 Tax=Oligotropha carboxidovorans RepID=EFTU_OLICO
tuf; elongation factor Tu; K02358 elongation factor Tu
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiac
SCNpilot_solid_2_scaffold_502_30
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


39665..39997
DNA (333bp) protein (111aa)
30S ribosomal protein S10 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NFL9_AFIFE
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
SCNpilot_solid_2_scaffold_502_31
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


40048..40779
DNA (732bp) protein (244aa)
50S ribosomal protein L3 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NB37_AFIFE rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 rbh
SCNpilot_solid_2_scaffold_502_32
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


40779..41399
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAE3_9BRAD rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 rbh
SCNpilot_solid_2_scaffold_502_33
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


41396..41695
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAE2_9BRAD
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
SCNpilot_solid_2_scaffold_502_34
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


41707..42543
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAE1_9BRAD rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 rbh
SCNpilot_solid_2_scaffold_502_35
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


42556..42834
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NFM6_AFIFE
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53
SCNpilot_solid_2_scaffold_502_36
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


42845..43231
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG06_9BRAD
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
SCNpilot_solid_2_scaffold_502_37
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


43249..43953
DNA (705bp) protein (235aa)
30S ribosomal protein S3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAD8_9BRAD rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
SCNpilot_solid_2_scaffold_502_38
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


43988..44401
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAD7_9BRAD
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
SCNpilot_solid_2_scaffold_502_39
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


44406..44618
DNA (213bp) protein (71aa)
50S ribosomal protein L29 n=2 Tax=Afipia RepID=D6VAD6_9BRAD
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
SCNpilot_solid_2_scaffold_502_40
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


44631..44879
DNA (249bp) protein (83aa)
30S ribosomal protein S17 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAD5_9BRAD
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
SCNpilot_solid_2_scaffold_502_41
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


44999..45367
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Afipia RepID=D6VAD4_9BRAD
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
SCNpilot_solid_2_scaffold_502_42
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


45367..45681
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAD3_9BRAD
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scra
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
SCNpilot_solid_2_scaffold_502_43
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


45674..46231
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAD2_9BRAD rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 rbh
SCNpilot_solid_2_scaffold_502_44
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


46280..46585
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7C0_9BRAD
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
SCNpilot_solid_2_scaffold_502_45
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


46596..46994
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAD0_9BRAD
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
SCNpilot_solid_2_scaffold_502_46
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


47008..47541
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAC9_9BRAD rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 rbh
SCNpilot_solid_2_scaffold_502_47
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


47553..47915
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNL1_AFIFE
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
SCNpilot_solid_2_scaffold_502_48
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


47967..48545
DNA (579bp) protein (193aa)
30S ribosomal protein S5 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH80_AFIFE rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 rbh
SCNpilot_solid_2_scaffold_502_49
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


48572..48766
DNA (195bp) protein (65aa)
50S ribosomal protein L30 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAC6_9BRAD
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
SCNpilot_solid_2_scaffold_502_50
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


48778..49293
DNA (516bp) protein (172aa)
50S ribosomal protein L15 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NFN6_AFIFE rbh
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
SCNpilot_solid_2_scaffold_502_51
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


49403..50734
DNA (1332bp) protein (444aa)
Protein translocase subunit SecY n=1 Tax=Afipia felis ATCC 53690 RepID=K8NB54_AFIFE rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY rbh
SCNpilot_solid_2_scaffold_502_52
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50731..51690
DNA (960bp) protein (320aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] rbh
Adenylate kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAC3_9BRAD rbh
SCNpilot_solid_2_scaffold_502_53
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


51870..52238
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH86_AFIFE
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
SCNpilot_solid_2_scaffold_502_54
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


52334..52723
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAC1_9BRAD
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
SCNpilot_solid_2_scaffold_502_55
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52840..53859
DNA (1020bp) protein (340aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAC0_9BRAD rbh
SCNpilot_solid_2_scaffold_502_56
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


54031..54450
DNA (420bp) protein (140aa)
50S ribosomal protein L17 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAB9_9BRAD
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
SCNpilot_solid_2_scaffold_502_57
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54546..55475
DNA (930bp) protein (310aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAB8_9BRAD rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFI50412.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
short chain dehydrogenase/reductase family oxidoreductase rbh
SCNpilot_solid_2_scaffold_502_58
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55488..56510)
DNA (1023bp) protein (341aa)
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAB6_9BRAD rbh
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:EFI50410.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="
zinc-dependent oxidoreductase rbh
Displaying items 31-60 of 83 in total

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