ggKbase home page

SCNpilot_solid_2_scaffold_502_38

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 43988..44401

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L16 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAD7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 137.0
  • Bit_score: 269
  • Evalue 1.50e-69
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 137.0
  • Bit_score: 269
  • Evalue 2.20e-69
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 137.0
  • Bit_score: 265
  • Evalue 7.00e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGATGCAACCCAAGAAGACGAAGTTCCGCAAGGCGCACAAGGGCCGTATCCACGGCGTCGCCTCGTCGGGCGCGACGTTGTCCTTCGGCCAGTTTGGTCTGAAGGCGATGGCGCCGGAGCGCATCACTGCGCGCCAGATCGAAGCCGCCCGCCGCGCGCTGACCCGTCACATGAAGCGTGTCGGTCGCGTGTGGATCCGGGTGTTCCCCGATCTTCCGGTGTCGAAGAAGCCTGCTGAAGTCCGCATGGGCTCGGGCAAGGGCGCACCGGAATTGTGGGTGGCGCGGGTGAAGCCCGGCCGTATCCTGTTCGAGATCGACGGTGTGAACGACCAGATTGCGCGTGAGGCGCTGTCGCTCGCTGCCGCCAAACTTCCGATCAAGACGCGCTTCGTTGCGCGCATCGCGGAGTAA
PROTEIN sequence
Length: 138
MMQPKKTKFRKAHKGRIHGVASSGATLSFGQFGLKAMAPERITARQIEAARRALTRHMKRVGRVWIRVFPDLPVSKKPAEVRMGSGKGAPELWVARVKPGRILFEIDGVNDQIAREALSLAAAKLPIKTRFVARIAE*