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SCNpilot_solid_2_scaffold_502_53

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 51870..52238

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH86_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 122.0
  • Bit_score: 238
  • Evalue 3.40e-60
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53 similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 122.0
  • Bit_score: 237
  • Evalue 1.40e-59
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 122.0
  • Bit_score: 233
  • Evalue 3.40e-59

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGGCCCGTATTGCAGGCGTCAATATCCCGACCAACAAGCGCGTCATCATCGCGCTTCAGTATATCCATGGCATCGGCCAGAAGAACGCCGCCACGATCATGGAGCAGCTCAAGATTCCGCTCGATCGCCGTGTGTCGCAGCTGACCGACCAGGAAGTTCTGCAGATTCGCGAAATGATCGACCGCGACTATCTCGTCGAGGGCGACCTTCGCCGTGAAGTCGGCATGAACATCAAGCGTCTGATGGACCTCGGCTGCTACCGCGGCCTGCGTCATCGCCGTGGCCTGCCAGTGCGCGGTCAGCGCACGCATACCAACGCCCGCACCCGCAAGGGGCCGGCGAAGGCGATCGCCGGCAAAAAGAAGTAA
PROTEIN sequence
Length: 123
VARIAGVNIPTNKRVIIALQYIHGIGQKNAATIMEQLKIPLDRRVSQLTDQEVLQIREMIDRDYLVEGDLRREVGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKKK*