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SCNpilot_solid_2_scaffold_502_49

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 48572..48766

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAC6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 64.0
  • Bit_score: 121
  • Evalue 2.50e-25
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 64.0
  • Bit_score: 121
  • Evalue 3.40e-25
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 63.0
  • Bit_score: 112
  • Evalue 6.10e-23

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
ATGGCCAAGGCCGCAAAAACCATCAAGGTCGAACAGACCGGCAGCGCGATCCGCCGTCAAAAAGCACAGCGCGAGACCCTGATCGGTCTGCGTCTCAACAAGATCGGCCGTGTCTCGGAATTGCAGGACACGCCTGCCGTGCGCGGTATGATCGCGAAGGTTCAGCACCTCGTTCGCGTCGTCGACGAGAAGTAA
PROTEIN sequence
Length: 65
MAKAAKTIKVEQTGSAIRRQKAQRETLIGLRLNKIGRVSELQDTPAVRGMIAKVQHLVRVVDEK*