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SCNpilot_solid_2_scaffold_547_25

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(24182..24499)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA66_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 105.0
  • Bit_score: 195
  • Evalue 2.80e-47
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFI50360.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 105.0
  • Bit_score: 195
  • Evalue 4.00e-47
hypothetical protein; K07726 putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 105.0
  • Bit_score: 173
  • Evalue 4.80e-41

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGAAGCGGTTGCGGTTGAAAGCGGATGGACGGATCGTCGAGGTGGTCGATGGCCGGGAAACCGCGTTTGTCGCGGGAGCTATTTCTGCGATCGATCCCGCGTTGGGCGCGACGCCACACGTGCGCGAGCTGCGGATGCGGGCCAAGCTGACGCAAGCCGAATTTGCCACCAAACTCTGTGTACCGATTGAAACCATTCGCAACTGGGAGCAGGGCAAACGCTCTCCGCGCGGACCTGCGCGAGCGCTTCTGGCGGTGATCGCGCATGCGCCGGACATGGTGTTCGCCGCACTTGCGGCCAATGGTCCGCGTAGCTGA
PROTEIN sequence
Length: 106
MKRLRLKADGRIVEVVDGRETAFVAGAISAIDPALGATPHVRELRMRAKLTQAEFATKLCVPIETIRNWEQGKRSPRGPARALLAVIAHAPDMVFAALAANGPRS*