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SCNpilot_solid_2_scaffold_547

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_547_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94..1470)
DNA (1377bp) protein (459aa)
pleD; response regulator (EC:2.7.7.65) rbh
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA40_9BRAD rbh
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:EFI50334.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
SCNpilot_solid_2_scaffold_547_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1482..1847)
DNA (366bp) protein (122aa)
Response regulator receiver protein n=2 Tax=Afipia RepID=D6VA41_9BRAD
divK; polar-differentiation response regulator DivK; K11443 two-component system, cell cycle response regulator DivK
Response regulator receiver protein {ECO:0000313|EMBL:EFI50335.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
SCNpilot_solid_2_scaffold_547_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1975..2265
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA42_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07722.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_547_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2407..3747
DNA (1341bp) protein (447aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=666684 species="Bacteria; Proteobacteria; Alp
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] rbh
DNA polymerase IV n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA43_9BRAD rbh
SCNpilot_solid_2_scaffold_547_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3757..4617)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA44_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI50338.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein rbh
SCNpilot_solid_2_scaffold_547_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4722..5189
DNA (468bp) protein (156aa)
Endoribonuclease L-PSP n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA45_9BRAD rbh
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:CEG07719.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc
putative endoribonuclease L-PSP
SCNpilot_solid_2_scaffold_547_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5189..5956
DNA (768bp) protein (256aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA46_9BRAD rbh
Cytoplasmic glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:CEG07718.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="
glycerophosphoryl diester phosphodiesterase rbh
SCNpilot_solid_2_scaffold_547_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6020..7186
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA47_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI50341.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K09919 hypothetical protein rbh
SCNpilot_solid_2_scaffold_547_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7187..8131)
DNA (945bp) protein (315aa)
Lytic transglycosylase catalytic n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA48_9BRAD rbh
Transglycosylase SLT domain protein {ECO:0000313|EMBL:CEG07716.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Ca
putative transglycosylase rbh
SCNpilot_solid_2_scaffold_547_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8189..8503
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA49_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07715.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_547_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8559..10919)
DNA (2361bp) protein (787aa)
ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA50_9BRAD rbh
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:CEG07714.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="
clpA; ATP-dependent Clp protease ATP-binding subunit ClpA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA rbh
SCNpilot_solid_2_scaffold_547_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11120..11728)
DNA (609bp) protein (203aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA51_9BRAD rbh
ATP-dependent Clp protease adapter protein ClpS {ECO:0000313|EMBL:CEG07713.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afip
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
SCNpilot_solid_2_scaffold_547_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11893..13764
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA52_9BRAD rbh
Flp pilus assembly protein TadG {ECO:0000313|EMBL:CEG07712.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc
hypothetical protein rbh
SCNpilot_solid_2_scaffold_547_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13860..14192)
DNA (333bp) protein (111aa)
Phasin n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA53_9BRAD
Phasin {ECO:0000313|EMBL:EFI50347.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_547_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14578..16374
DNA (1797bp) protein (599aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EFI50348.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EFI50348.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Br
dacA2; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4 3.5.2.6) rbh
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA54_9BRAD rbh
SCNpilot_solid_2_scaffold_547_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16598..17332)
DNA (735bp) protein (245aa)
Heat shock protein DnaJ domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA55_9BRAD rbh
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:EFI50349.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
DnaJ domain-containing protein rbh
SCNpilot_solid_2_scaffold_547_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17395..18300)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA56_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI50350.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_547_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18525..19382
DNA (858bp) protein (286aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094332}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
panC; pantoate-beta-alanine ligase PanC (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] rbh
Pantothenate synthetase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA57_9BRAD rbh
SCNpilot_solid_2_scaffold_547_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19396..19833)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA58_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07706.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_547_20
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19904..20836)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA59_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI50353.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_547_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20923..21114)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHD4_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27859.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_547_22
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21381..22037)
DNA (657bp) protein (219aa)
glutathione S-transferase; K04097 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA61_9BRAD rbh
Glutathione S-transferase domain protein {ECO:0000313|EMBL:EFI50355.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp
SCNpilot_solid_2_scaffold_547_23
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22444..23238)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA64_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI50358.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_547_24
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23298..24113)
DNA (816bp) protein (272aa)
2,5-diketo-D-gluconic acid reductase A (EC:1.1.1.274); K05885 2,5-diketo-D-gluconate reductase [EC:1.1.1.274] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJX5_AFIFE rbh
2,5-diketo-D-gluconic acid reductase B {ECO:0000313|EMBL:CEG07698.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
SCNpilot_solid_2_scaffold_547_25
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24182..24499)
DNA (318bp) protein (106aa)
Transcriptional regulator, XRE family n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA66_9BRAD
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFI50360.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1
hypothetical protein; K07726 putative transcriptional regulator
SCNpilot_solid_2_scaffold_547_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24724..25515
DNA (792bp) protein (264aa)
Polysaccharide deacetylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA67_9BRAD rbh
Bifunctional xylanase/deacetylase {ECO:0000313|EMBL:CEG07696.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
putative polysaccharide deacetylase rbh
SCNpilot_solid_2_scaffold_547_27
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25578..26666
DNA (1089bp) protein (363aa)
Polysaccharide deacetylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA68_9BRAD rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:EFI50362.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afip
polysaccharide deacetylase rbh
SCNpilot_solid_2_scaffold_547_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26807..27460
DNA (654bp) protein (218aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA69_9BRAD rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CEG07694.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
putative amidase rbh
SCNpilot_solid_2_scaffold_547_29
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27696..29399
DNA (1704bp) protein (568aa)
ggt4; gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] rbh
Gamma-glutamyltransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NB95_AFIFE rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:EKS27847.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.
SCNpilot_solid_2_scaffold_547_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29509..29712)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA73_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07690.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein; K09165 hypothetical protein
Displaying items 1-30 of 38 in total

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