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SCNpilot_expt_500_bf_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_161_1
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2..2704)
DNA (2703bp) protein (901aa)
hypothetical protein, partial n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00036F75BE rbh
Strain DSM 12611 Contig11, whole genome shotgun sequence {ECO:0000313|EMBL:KIO52049.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
PKD domain-containing protein
SCNpilot_expt_500_bf_scaffold_161_2
unknown

Not on your lists

2918..3022
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_161_3
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3227..3730
DNA (504bp) protein (168aa)
phosphohistidine phosphatase, SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Putative phosphohistidine phosphatase, SixA n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FB85_FLAJ1
Putative phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:ABQ07535.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_161_4
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3714..5852
DNA (2139bp) protein (713aa)
ppk; polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1] rbh
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
polyphosphate kinase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B78CC2 rbh
SCNpilot_expt_500_bf_scaffold_161_5
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5923..6813
DNA (891bp) protein (297aa)
ppx; exopolyphosphatase (EC:3.6.1.11); K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] rbh
exopolyphosphatase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B35816 rbh
Ppx protein {ECO:0000313|EMBL:ESU25435.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
SCNpilot_expt_500_bf_scaffold_161_6
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6888..7349)
DNA (462bp) protein (154aa)
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:AIJ37861.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AIJ37861.1};; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
Probable DNA polymerase III subunit n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GY87_FLAPJ
hypothetical protein
SCNpilot_expt_500_bf_scaffold_161_7
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7520..8626)
DNA (1107bp) protein (369aa)
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:KFC58358.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KFC58358.1};; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
DNA polymerase III subunit (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] rbh
DNA polymerase III, subunit gamma/tau n=1 Tax=Flavobacterium sp. CF136 RepID=J2S665_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_161_8
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8692..9300)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI000299DEC4
Uncharacterized protein {ECO:0000313|EMBL:EDM38527.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
SCNpilot_expt_500_bf_scaffold_161_9
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9314..10393)
DNA (1080bp) protein (360aa)
DNA topoisomerase (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] rbh
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000364F2B4 rbh
DNA topoisomerase I {ECO:0000313|EMBL:KGO94586.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
SCNpilot_expt_500_bf_scaffold_161_10
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10397..10705)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037F19D0
Uncharacterized protein {ECO:0000313|EMBL:KGD67704.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_161_11
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11165..11860)
DNA (696bp) protein (232aa)
Two-component system, transcriptional regulatory protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SKP5_9FLAO rbh
Two-component system, transcriptional regulatory protein {ECO:0000313|EMBL:ESU27151.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
two-component system response regulatory protein rbh
SCNpilot_expt_500_bf_scaffold_161_12
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11873..13273)
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
two-component system sensor histidine kinase (EC:2.7.3.-) rbh
Two-component system sensor histidine kinase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLQ3_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_161_13
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13396..14409
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4ECEA rbh
hypothetical protein rbh
Putative membrane spanning protein {ECO:0000313|EMBL:AIJ37884.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
SCNpilot_expt_500_bf_scaffold_161_14
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14399..16489
DNA (2091bp) protein (697aa)
TonB-denpendent receptor n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4F688 rbh
TonB-dependent receptor {ECO:0000313|EMBL:KIX22931.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
TonB-dependent receptor rbh
SCNpilot_expt_500_bf_scaffold_161_15
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16541..17137)
DNA (597bp) protein (199aa)
Modification methyltransferase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWM6_9FLAO rbh
Methyltransferase {ECO:0000313|EMBL:KIA93090.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_161_16
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17138..17956)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B74335 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA86622.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_161_17
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18063..19484
DNA (1422bp) protein (474aa)
ATP-dependent exodeoxyribonuclease (EC:3.1.11.-); K01144 exodeoxyribonuclease V [EC:3.1.11.5] rbh
Probable ATP-dependent exodeoxyribonuclease n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GYA3_FLAPJ rbh
ATP-dependent endonuclease {ECO:0000313|EMBL:KIA93092.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
SCNpilot_expt_500_bf_scaffold_161_18
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19577..20302
DNA (726bp) protein (242aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
3-deoxy-D-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] rbh
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FV86_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_161_19
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20542..20898
DNA (357bp) protein (119aa)
PKD domain containing protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FLY5_FLAJ1
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ABQ03792.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_161_20
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21117..21779)
DNA (663bp) protein (221aa)
Spermidine synthase n=1 Tax=Flavobacterium sp. CF136 RepID=J2SI98_9FLAO
Spermidine synthase {ECO:0000313|EMBL:EJL65187.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
spermine synthase
SCNpilot_expt_500_bf_scaffold_161_21
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21838..22389
DNA (552bp) protein (184aa)
Acyltransferase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWM0_9FLAO
Acyltransferase {ECO:0000313|EMBL:KGO90048.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
acyltransferase
SCNpilot_expt_500_bf_scaffold_161_22
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

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22467..23486
DNA (1020bp) protein (340aa)
Probable lipoprotein id=2463316 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes rbh
lipoprotein precursor rbh
Tax=GWF1_Flavobacteria_32_7_curated
SCNpilot_expt_500_bf_scaffold_161_23
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23551..23940)
DNA (390bp) protein (130aa)
XRE family transcriptional regulator n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RXX0_9FLAO
DNA-binding protein {ECO:0000313|EMBL:KDN56300.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
bacteriophage CI repressor
SCNpilot_expt_500_bf_scaffold_161_24
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24245..25399
DNA (1155bp) protein (385aa)
Peptidase M14, carboxypeptidase A n=1 Tax=Flavobacterium sp. F52 RepID=J0RUC6_9FLAO rbh
Peptidase M14, carboxypeptidase A {ECO:0000313|EMBL:EJF99349.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
peptidase M14, carboxypeptidase A rbh
SCNpilot_expt_500_bf_scaffold_161_25
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25477..25956
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family protein n=2 Tax=Flavobacterium RepID=V6SG59_9FLAO rbh
Transcriptional regulator {ECO:0000313|EMBL:KGO85216.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
putative AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
SCNpilot_expt_500_bf_scaffold_161_26
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26035..28620
DNA (2586bp) protein (862aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31); K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] rbh
phosphoenolpyruvate carboxylase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002DE710B rbh
SCNpilot_expt_500_bf_scaffold_161_27
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28598..29146
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FV67_9FLAO
Damage-inducible protein DinB {ECO:0000313|EMBL:KGD67724.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_161_28
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29668..30066)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:KDN56293.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein
Putative uncharacterized protein id=4975015 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
SCNpilot_expt_500_bf_scaffold_161_29
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30077..31048)
DNA (972bp) protein (324aa)
hypothetical protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] rbh
deoxyhypusine synthase n=1 Tax=Flavobacterium rivuli RepID=UPI00035D9453 rbh
Deoxyhypusine synthase {ECO:0000313|EMBL:KGO83426.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
SCNpilot_expt_500_bf_scaffold_161_30
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31173..32573)
DNA (1401bp) protein (467aa)
Arginine decarboxylase {ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|SAAS:SAAS00212226};; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
Orn/DAP/Arg decarboxylase 2; K01585 arginine decarboxylase [EC:4.1.1.19] rbh
decarboxylase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000348D840 rbh
Displaying items 1-30 of 146 in total

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