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SCNpilot_cont_1000_p_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_172_1
unknown

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_172_2
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92..334
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037576E8
Membrane protein {ECO:0000313|EMBL:EWM10752.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_172_3
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

331..1119
DNA (789bp) protein (263aa)
sodium:proton antiporter n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00035D7016
Sodium:proton antiporter {ECO:0000313|EMBL:AJF63713.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
hypothetical protein; K05566 multicomponent Na+:H+ antiporter subunit B
SCNpilot_cont_1000_p_scaffold_172_4
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1116..1478
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3AYB2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD93206.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
dehydrogenase; K05567 multicomponent Na+:H+ antiporter subunit C
SCNpilot_cont_1000_p_scaffold_172_5
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1490..3409
DNA (1920bp) protein (640aa)
NADH-ubiquinone/plastoquinone (Complex I) oxidoreductase n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EK60_STRRM rbh
NADH-ubiquinone/plastoquinone (Complex I) oxidoreductase {ECO:0000313|EMBL:ELQ79524.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
mrpD; cation antiporter NADH-dehydrogenase; K05568 multicomponent Na+:H+ antiporter subunit D rbh
SCNpilot_cont_1000_p_scaffold_172_6
unknown

Not on your lists

4281..4634
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_172_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4599..5600)
DNA (1002bp) protein (334aa)
short-chain dehydrogenase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628C9A
Oxidoreductase {ECO:0000313|EMBL:AII11020.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_1000_p_scaffold_172_8
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5597..6433)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000373F307
oxidoreductase, SDR family rbh
Oxidoreductase, SDR family {ECO:0000313|EMBL:AGB24744.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
SCNpilot_cont_1000_p_scaffold_172_9
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6430..7266)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI00037CC507
Uncharacterized protein {ECO:0000313|EMBL:AII10773.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_172_10
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7294..8397)
DNA (1104bp) protein (368aa)
glucose dehydrogenase (GDH) (EC:1.1.1.1)
Oxidoreductase, zinc-binding dehydrogenase family protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7FEF7_9ACTO rbh
Oxidoreductase, zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:ELP69773.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
SCNpilot_cont_1000_p_scaffold_172_11
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8394..9287)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI0003732EDF rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KDN73497.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
SCNpilot_cont_1000_p_scaffold_172_12
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9448..10248
DNA (801bp) protein (267aa)
Transcriptional regulator, GntR family n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V3M2_9ACTO
Membrane protein {ECO:0000313|EMBL:EXU64925.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
GntR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_172_13
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10280..11188
DNA (909bp) protein (303aa)
Glyoxalase/bleomycin resistance protein/dioxygenase protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UQK9_MYCVA rbh
Glyoxalase {ECO:0000313|EMBL:AII11420.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
Glyoxalase/bleomycin resistance protein/dioxygenase protein
SCNpilot_cont_1000_p_scaffold_172_14
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11193..11855
DNA (663bp) protein (221aa)
Decarboxylase protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CDY3_STRBB
decarboxylase
Decarboxylase protein {ECO:0000313|EMBL:ADI04648.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
SCNpilot_cont_1000_p_scaffold_172_15
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11852..12748
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003813128 rbh
Glyoxalase {ECO:0000313|EMBL:EWT07656.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
glyoxalase/bleomycin resistance protein/dioxygenase rbh
SCNpilot_cont_1000_p_scaffold_172_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12981..14810)
DNA (1830bp) protein (610aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D236_PSEUX rbh
Fis family transcriptional regulator rbh
GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEA28096.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_172_17
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15269..16888
DNA (1620bp) protein (540aa)
cyclohexanone monooxygenase (EC:1.14.13.22); K03379 cyclohexanone monooxygenase [EC:1.14.13.22] rbh
Cyclohexanone monooxygenase n=1 Tax=Rhodococcus opacus M213 RepID=K8XKW0_RHOOP rbh
Cyclohexanone monooxygenase {ECO:0000313|EMBL:EKT82268.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
SCNpilot_cont_1000_p_scaffold_172_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16919..17728
DNA (810bp) protein (270aa)
Beta-lactamase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D238_PSEUX rbh
beta-lactamase domain-containing protein rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:AEA28098.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_172_19
unknown

Not on your lists

17748..18005
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_172_20
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18451..19362
DNA (912bp) protein (304aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WBZ2_KINRD rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABS04331.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_1000_p_scaffold_172_21
unknown

Not on your lists

comp(19311..19604)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_172_22
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19853..21241
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627D16 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM49624.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
LGFP repeat protein
SCNpilot_cont_1000_p_scaffold_172_23
unknown

Not on your lists

21263..21418
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_172_24
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21621..22094
DNA (474bp) protein (158aa)
Heat shock protein Hsp20 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGK3_NAKMY
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ACV78186.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_p_scaffold_172_25
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22277..22585)
DNA (309bp) protein (103aa)
Arginine/agmatine antiporter n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DAI2_9NOCA
Arginine/agmatine antiporter {ECO:0000313|EMBL:CCQ13541.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
arginine/ornithine antiporter
SCNpilot_cont_1000_p_scaffold_172_26
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22971..23870)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI000361C98E rbh
SPFH domain/Band 7 family protein {ECO:0000313|EMBL:EWM12130.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
band 7 domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_172_27
unknown

Not on your lists

24040..24306
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_172_28
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24303..24776
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036CF8BE
signal transduction histidine kinase-like protein
Signal transduction histidine kinase-like protein {ECO:0000313|EMBL:ACZ87657.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_1000_p_scaffold_172_29
unknown

Not on your lists

comp(24948..25787)
DNA (840bp) protein (280aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_172_30
unknown

Not on your lists

25808..26116
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying items 1-30 of 135 in total

View Taxonomy