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SCNpilot_cont_1000_p_scaffold_432

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_432_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80..1078
DNA (999bp) protein (333aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D100_PSEUX rbh
hopanoid biosynthesis associated radical SAM protein HpnH rbh
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:AEA25852.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1166..1819
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D101_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA25853.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1867..2937)
DNA (1071bp) protein (357aa)
Monogalactosyldiacylglycerol synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D102_PSEUX rbh
monogalactosyldiacylglycerol synthase rbh
Monogalactosyldiacylglycerol synthase {ECO:0000313|EMBL:AEA25854.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3053..5455
DNA (2403bp) protein (801aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D103_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA25855.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5480..6391
DNA (912bp) protein (304aa)
Integral membrane protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D104_PSEUX rbh
hypothetical protein rbh
Integral membrane protein {ECO:0000313|EMBL:AEA25856.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6388..7107
DNA (720bp) protein (240aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D105_PSEUX rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEA25857.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7031..7447)
DNA (417bp) protein (139aa)
phosphinothricin acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
Phosphinothricin acetyltransferase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PUE1_KRIFD
Phosphinothricin acetyltransferase {ECO:0000313|EMBL:ADB35192.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_1000_p_scaffold_432_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7434..8252)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Streptomyces purpureus RepID=UPI0003640D73 rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB53508.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_1000_p_scaffold_432_9
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8293..9273
DNA (981bp) protein (327aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6); K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
RNA polymerase factor sigma-70 n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WZQ7_9NOCA rbh
Sigma-70 region 2 domain protein {ECO:0000313|EMBL:EWC59315.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
SCNpilot_cont_1000_p_scaffold_432_10
unknown

Not on your lists

9441..9665
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_432_11
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9614..10183)
DNA (570bp) protein (190aa)
phosphoglycerate mutase n=1 Tax=Patulibacter americanus RepID=UPI0003B68E95
Phosphoglycerate mutase {ECO:0000313|EMBL:KFL49416.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
phosphoglycerate mutase
SCNpilot_cont_1000_p_scaffold_432_12
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10200..10598)
DNA (399bp) protein (133aa)
glyoxalase n=1 Tax=Humibacter albus RepID=UPI0003B4A283
Glyoxalase/bleomycin resistance protein/dioxygenase; K06991
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EED08240.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius LAA1.;"
SCNpilot_cont_1000_p_scaffold_432_13
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10595..11356)
DNA (762bp) protein (254aa)
phosphosulfolactate synthase; K08097 phosphosulfolactate synthase [EC:4.4.1.19] rbh
Phosphosulfolactate synthase {ECO:0000313|EMBL:ADP83938.1}; EC=4.4.1.19 {ECO:0000313|EMBL:ADP83938.1};; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Phosphosulfolactate synthase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IZM0_FRASU rbh
SCNpilot_cont_1000_p_scaffold_432_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11358..12503)
DNA (1146bp) protein (382aa)
Acyltransferase 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRB8_PSEUX rbh
acyltransferase rbh
Acyltransferase 3 {ECO:0000313|EMBL:AEA25209.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_15
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12500..13936)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003633DCB rbh
AMP-dependent synthetase and ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADP83939.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_1000_p_scaffold_432_16
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13963..14919
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000381622E
Polyhydroxybutyrate depolymerase {ECO:0000313|EMBL:ETW24824.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
polyhydroxybutyrate depolymerase
SCNpilot_cont_1000_p_scaffold_432_17
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14903..15181)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5PFM9_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:CDO90517.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_432_18
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15184..15942)
DNA (759bp) protein (253aa)
carboxymethylenebutenolidase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037B8F38 rbh
Carboxymethylenebutenolidase {ECO:0000313|EMBL:KDN15997.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
carboxymethylenebutenolidase rbh
SCNpilot_cont_1000_p_scaffold_432_19
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16593..17987)
DNA (1395bp) protein (465aa)
MFS transporter n=1 Tax=Amycolatopsis methanolica RepID=UPI00035C72D8 rbh
General substrate transporter {ECO:0000313|EMBL:AIJ26813.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
arabinose efflux permease family protein rbh
SCNpilot_cont_1000_p_scaffold_432_20
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18048..19247)
DNA (1200bp) protein (400aa)
fumarylacetoacetase; K01555 fumarylacetoacetase [EC:3.7.1.2] rbh
fumarylacetoacetase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035F4A67 rbh
Fumarylacetoacetase {ECO:0000313|EMBL:EOD70299.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
SCNpilot_cont_1000_p_scaffold_432_21
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19253..20452)
DNA (1200bp) protein (400aa)
homogentisate 12-dioxygenase; K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] rbh
homogentisate 1,2-dioxygenase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036E0826 rbh
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:EFL09271.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
SCNpilot_cont_1000_p_scaffold_432_22
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20452..22188)
DNA (1737bp) protein (579aa)
pentachlorophenol monooxygenase (EC:1.14.13.50); K03391 pentachlorophenol monooxygenase [EC:1.14.13.50] rbh
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X2Q2_9PSEU rbh
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EHR50991.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
SCNpilot_cont_1000_p_scaffold_432_23
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22188..23153)
DNA (966bp) protein (322aa)
beta lactamase (EC:3.5.2.6); K01467 beta-lactamase [EC:3.5.2.6] rbh
beta lactamase n=1 Tax=Amycolatopsis RepID=UPI0002628C69 rbh
Beta-lactamase class B {ECO:0000313|EMBL:AIJ24289.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_1000_p_scaffold_432_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23378..24637
DNA (1260bp) protein (420aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1T8_PSEUX rbh
ErfK/YbiS/YcfS/YnhG family protein rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEA27998.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_25
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24657..27188
DNA (2532bp) protein (844aa)
HAD superfamily ATPase; K01552 [EC:3.6.3.-] rbh
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S6P5_GEOOG rbh
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:ADB75419.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_p_scaffold_432_26
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27195..27476
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00037DE293
Uncharacterized protein {ECO:0000313|EMBL:KIA61483.1}; TaxID=1141657 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
YggT family protein
SCNpilot_cont_1000_p_scaffold_432_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27512..27994
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0G2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26758.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27995..28705)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJZ4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27019.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28909..29115)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1Q8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27968.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_432_30
unknown

Not on your lists

comp(29153..29416)
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying items 1-30 of 67 in total

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