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SCNpilot_cont_1000_p_scaffold_449

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_449_1
unknown

Not on your lists

469..918
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_449_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2217..2987)
DNA (771bp) protein (257aa)
UDP pyrophosphate synthase; K12503 short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] rbh
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Isoprenyl transferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIY1_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_449_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3161..3784
DNA (624bp) protein (208aa)
Channel protein, hemolysin III family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIY0_PSEUX rbh
hemolysin III family channel protein; K11068 hemolysin III rbh
Channel protein, hemolysin III family {ECO:0000313|EMBL:AEA23200.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3786..4397)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIX9_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA23199.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4697..6706)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIX8_PSEUX rbh
hypothetical protein; K06888 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA23198.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6720..6968)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIX7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23197.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6989..7891)
DNA (903bp) protein (301aa)
Mycothiol S-conjugate amidase {ECO:0000256|HAMAP-Rule:MF_01482}; EC=3.5.1.115 {ECO:0000256|HAMAP-Rule:MF_01482};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Mycothiol S-conjugate amidase Mca n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIX5_PSEUX rbh
mycothiol conjugate amidase Mca rbh
SCNpilot_cont_1000_p_scaffold_449_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8392..8886
DNA (495bp) protein (165aa)
Transcription elongation factor GreA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIX4_PSEUX
transcription elongation factor GreA; K03624 transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8876..10105)
DNA (1230bp) protein (410aa)
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] rbh
Threonine dehydratase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIX3_PSEUX rbh
Threonine dehydratase {ECO:0000313|EMBL:AEA23193.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10189..10413
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVC8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23192.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10410..11558)
DNA (1149bp) protein (383aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein; K01739 cystathionine gamma-synthase [EC:2.5.1.48] rbh
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVC7_PSEUX rbh
Cys/Met metabolism pyridoxal-phosphate-dependent protein {ECO:0000313|EMBL:AEA23191.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11604..12974)
DNA (1371bp) protein (457aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] rbh
Cystathionine beta-synthase {ECO:0000313|EMBL:AEA23190.1}; EC=2.5.1.47 {ECO:0000313|EMBL:AEA23190.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Cystathionine beta-synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVC6_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_449_13
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13054..13473
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SMH1_AMYOR
Uncharacterized protein {ECO:0000313|EMBL:AJK57292.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_449_14
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13683..14336
DNA (654bp) protein (218aa)
RNA polymerase sigma factor SigD n=1 Tax=Sciscionella marina RepID=UPI00035FF7E7
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU38945.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCNpilot_cont_1000_p_scaffold_449_15
Rhodococcus sp. Chr-9, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14373..15278
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WKN5_9NOCA rbh
Uncharacterized protein {ECO:0000313|EMBL:KHJ73347.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;"
hypothetical protein; K07454 putative restriction endonuclease rbh
SCNpilot_cont_1000_p_scaffold_449_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15436..16671
DNA (1236bp) protein (412aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEA23184.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AEA23184.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Acetyl-CoA acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVC0_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_449_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16741..17550)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVB9_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA23183.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17647..18045)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVB8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23182.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_19
unknown

Not on your lists

18233..18643
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B3054E
SCNpilot_cont_1000_p_scaffold_449_20
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18964..19206
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD22
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG01109.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_1000_p_scaffold_449_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19203..19898
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRJ6_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA26204.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_449_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19908..20369
DNA (462bp) protein (154aa)
OsmC/Ohr family protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E4L4_9ACTN
OsmC/Ohr family protein {ECO:0000313|EMBL:EHN11385.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
OsmC family protein
SCNpilot_cont_1000_p_scaffold_449_23
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20359..20922)
DNA (564bp) protein (188aa)
TetR family transcriptional regulator n=1 Tax=Rhodococcus RepID=UPI00029B4D48
Tetr family transcriptional regulator {ECO:0000313|EMBL:CDZ89208.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
Transcriptional regulator, TetR family
SCNpilot_cont_1000_p_scaffold_449_24
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20961..22100
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S463_GEOOG rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADB75053.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_p_scaffold_449_25
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22187..22945
DNA (759bp) protein (253aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Streptomyces sp. SS RepID=UPI00030C873C rbh
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:AJF67952.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
3-hydroxyacyl-CoA dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_449_26
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22975..23793
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Saccharomonospora saliphila RepID=UPI00037F229B
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCH27968.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
SCNpilot_cont_1000_p_scaffold_449_27
unknown

Not on your lists

23807..24076
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD6D
SCNpilot_cont_1000_p_scaffold_449_28
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24168..24974
DNA (807bp) protein (269aa)
Phenazine biosynthesis protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H7X3_STRPR rbh
Oxidoreductase {ECO:0000313|EMBL:EXU62052.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
PhzF family phenazine biosynthesis protein; K06998 rbh
SCNpilot_cont_1000_p_scaffold_449_29
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25127..25918)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3BSE7_9ACTO
Methyltransferase {ECO:0000313|EMBL:KFF98747.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_449_30
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26151..26612)
DNA (462bp) protein (154aa)
cupin n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036D2311
Cupin {ECO:0000313|EMBL:KJC56578.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
cupin
Displaying items 1-30 of 68 in total

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