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SCNpilot_cont_1000_p_scaffold_467

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_467_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76..1341)
DNA (1266bp) protein (422aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:AEA26397.1}; EC=2.7.11.25 {ECO:0000313|EMBL:AEA26397.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000373CAC8 rbh
serine/threonine protein kinase rbh
SCNpilot_cont_1000_p_scaffold_467_2
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1528..1959
DNA (432bp) protein (144aa)
Iron-regulated LSR2 protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VFZ7_9ACTO
Iron-regulated LSR2 protein {ECO:0000313|EMBL:EFL10351.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
lysyl tRNA synthetase-like protein
SCNpilot_cont_1000_p_scaffold_467_3
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2071..3036
DNA (966bp) protein (322aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Streptomyces somaliensis RepID=UPI00029A8785 rbh
luciferase family protein rbh
Luciferase family protein {ECO:0000313|EMBL:ABW16124.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_1000_p_scaffold_467_4
unknown

Not on your lists

3148..3627
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037BE5EA
SCNpilot_cont_1000_p_scaffold_467_5
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3725..4498
DNA (774bp) protein (258aa)
FAD-binding molybdopterin dehydrogenase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000373A451 rbh
FAD-binding molybdopterin dehydrogenase {ECO:0000313|EMBL:KIF72155.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
Oxidoreductase rbh
SCNpilot_cont_1000_p_scaffold_467_6
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4495..5808
DNA (1314bp) protein (438aa)
Aldehyde oxidase and xanthine dehydrogenase domains protein n=1 Tax=Streptomyces sp. e14 RepID=D6KEJ0_9ACTO
Aldehyde oxidase and xanthine dehydrogenase domains protein {ECO:0000313|EMBL:EFF89495.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
putative xanthine dehydrogenase
SCNpilot_cont_1000_p_scaffold_467_7
Streptomyces fulvissimus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5805..7181
DNA (1377bp) protein (459aa)
Aldehyde oxidase and xanthine dehydrogenase domains protein (EC:1.17.1.4) rbh
Uncharacterized protein {ECO:0000313|EMBL:AGK80737.1}; EC=1.17.1.4 {ECO:0000313|EMBL:AGK80737.1};; TaxID=1303692 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fulvissimus DSM 40593.;"
aldehyde oxidase n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI00036AF8AA rbh
SCNpilot_cont_1000_p_scaffold_467_8
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7326..9371
DNA (2046bp) protein (682aa)
UPI0003D04364 related cluster n=1 Tax=unknown RepID=UPI0003D04364
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ESZ89050.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
acyl-CoA dehydrogenase
SCNpilot_cont_1000_p_scaffold_467_9
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9374..10390)
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:AHH97001.1}; EC=1.2.1.12 {ECO:0000313|EMBL:AHH97001.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037D6DAE rbh
gapA; glyceraldehyde-3-phosphate dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_467_10
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10793..11470
DNA (678bp) protein (226aa)
universal stress protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDEC9
Universal stress protein family {ECO:0000313|EMBL:CEL13279.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
universal stress protein
SCNpilot_cont_1000_p_scaffold_467_11
unknown

Not on your lists

11470..11691
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_467_12
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11680..12378)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037583D7 rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB73535.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_p_scaffold_467_13
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12517..13536
DNA (1020bp) protein (340aa)
Acyltransferase 3 n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21EG5_SACD2
hypothetical protein
Acyltransferase 3 {ECO:0000313|EMBL:ABD82914.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
SCNpilot_cont_1000_p_scaffold_467_14
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13738..14325
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Streptomyces sp. TOR3209 RepID=UPI0003048E80
Uncharacterized protein {ECO:0000313|EMBL:EHN73771.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
SCI7.09c; hypothetical protein
SCNpilot_cont_1000_p_scaffold_467_15
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14505..14828
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037BD953
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ADB76627.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_p_scaffold_467_16

Not on your lists

comp(14767..15312)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000381A594
Marine sediment metagenome DNA, contig: S03H2_L00291 {ECO:0000313|EMBL:GAH35178.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Electron transport protein SCO1/SenC; K07152
SCNpilot_cont_1000_p_scaffold_467_17
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15309..16775)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VST8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC56810.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_467_18
unknown

Not on your lists

16902..17579
DNA (678bp) protein (226aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_467_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17799..18752
DNA (954bp) protein (318aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL95_PSEUX rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEA25937.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_467_20
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18881..19792
DNA (912bp) protein (304aa)
membrane protein n=1 Tax=Saccharomonospora saliphila RepID=UPI000374B34B rbh
hypothetical protein rbh
Membrane protein {ECO:0000313|EMBL:EQD85062.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
SCNpilot_cont_1000_p_scaffold_467_21
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19807..21312
DNA (1506bp) protein (502aa)
fprB; ferredoxin--NADP+ reductase (EC:1.18.1.2); K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] rbh
Ferredoxin--NADP+ reductase {ECO:0000313|EMBL:CAM03660.1}; EC=1.18.1.2 {ECO:0000313|EMBL:CAM03660.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI0003826307 rbh
SCNpilot_cont_1000_p_scaffold_467_22
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21314..22768)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B32B88 rbh
UPF0061 protein MPHLEI_19719 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_467_23
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23463..24278)
DNA (816bp) protein (272aa)
carveol dehydrogenase (EC:1.1.1.243) rbh
3-ketoacyl-ACP reductase n=1 Tax=Actinoplanes globisporus RepID=UPI0003735236 rbh
Oxidoreductase, SDR family {ECO:0000313|EMBL:EIV91772.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
SCNpilot_cont_1000_p_scaffold_467_24
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24339..24893
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000376CA6B
Transcriptional regulator {ECO:0000313|EMBL:EWT02459.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
transcriptional regulator
SCNpilot_cont_1000_p_scaffold_467_25
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24781..25476)
DNA (696bp) protein (232aa)
alpha/beta hydrolase n=1 Tax=Rhodococcus sp. DK17 RepID=UPI0002F2A8CA
Alpha/beta hydrolase {ECO:0000313|EMBL:AII09314.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
alpha/beta hydrolase
SCNpilot_cont_1000_p_scaffold_467_26
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25508..26488)
DNA (981bp) protein (327aa)
Oxidoreductase n=3 Tax=Amycolatopsis mediterranei RepID=D8I3I9_AMYMU rbh
oxidoreductase rbh
Oxidoreductase {ECO:0000313|EMBL:AEK45608.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_1000_p_scaffold_467_27
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26488..28203)
DNA (1716bp) protein (572aa)
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:CEL14271.1}; EC=6.2.1.1 {ECO:0000313|EMBL:CEL14271.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
AMP-binding enzyme n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S805_9ACTO rbh
AMP-dependent synthetase and ligase rbh
SCNpilot_cont_1000_p_scaffold_467_28
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28305..28577
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S804_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFQ84820.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
SCNpilot_cont_1000_p_scaffold_467_29
unknown

Not on your lists

comp(28897..29010)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_467_30
unknown

Not on your lists

comp(29017..29196)
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying items 1-30 of 72 in total

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