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SCNpilot_cont_1000_p_scaffold_778

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_778_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32..277)
DNA (246bp) protein (82aa)
GntR family transcriptional regulator n=1 Tax=Salinispora arenicola RepID=UPI00035F5315
integrase protein
Integrase family protein {ECO:0000313|EMBL:AEA26958.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_778_2
unknown

Not on your lists

610..1380
DNA (771bp) protein (257aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_778_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1364..1906)
DNA (543bp) protein (181aa)
Ricin B lectin Precursor (EC:3.2.1.39)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L6N8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH19485.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
SCNpilot_cont_1000_p_scaffold_778_4
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2026..2754)
DNA (729bp) protein (243aa)
Caax amino protease n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7MPZ0_9MICC
Caax amino protease {ECO:0000313|EMBL:EMQ97106.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
Abortive infection protein
SCNpilot_cont_1000_p_scaffold_778_5
Gordonia amicalis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2933..3565)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gordonia amicalis NBRC 100051 = JCM 11271 RepID=L7KYK4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC53002.1}; TaxID=1220574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amicalis NBRC 100051 = JCM 11271.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_778_6
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3608..4780)
DNA (1173bp) protein (391aa)
Putative RNA polymerase, sigma subunit, ECF subfamily n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K3M0_SACES rbh
putative RNA polymerase, sigma subunit, ECF subfamily rbh
Putative RNA polymerase, sigma subunit, ECF subfamily {ECO:0000313|EMBL:CCH31479.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
SCNpilot_cont_1000_p_scaffold_778_7
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4777..5148)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036DB2AD
Putative uncharacterized protein {ECO:0000313|EMBL:EFL11629.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_778_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5229..5612
DNA (384bp) protein (128aa)
glyoxalase n=1 Tax=Streptomyces sp. CNT372 RepID=UPI000365A52B
Uncharacterized protein {ECO:0000313|EMBL:CCH53145.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Glyoxalase/bleomycin resistance protein/dioxygenase; K07032
SCNpilot_cont_1000_p_scaffold_778_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5624..5992
DNA (369bp) protein (123aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLA5_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA25947.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_778_10
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5973..6449)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037A3180
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AEW99471.1}; Uncharacterized protein {ECO:0000313|EMBL:CCB71488.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
SCNpilot_cont_1000_p_scaffold_778_11
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6459..6749)
DNA (291bp) protein (97aa)
Nitrite reductase small subunit n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6W2W0_9ACTO
Nitrite reductase small subunit {ECO:0000313|EMBL:GAB93500.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
putative nitrite reductase small subunit
SCNpilot_cont_1000_p_scaffold_778_12
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6746..9235)
DNA (2490bp) protein (830aa)
nitrite reductase (NAD(P)H) large subunit; K00362 nitrite reductase (NAD(P)H) large subunit [EC:1.7.1.4] rbh
nitrite reductase n=1 Tax=Amycolatopsis balhimycina RepID=UPI000376CA33 rbh
Nitrite reductase (NAD(P)H), large subunit {ECO:0000313|EMBL:ABM14289.1}; TaxID=350058 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1).;"
SCNpilot_cont_1000_p_scaffold_778_13
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9237..9584)
DNA (348bp) protein (116aa)
molybdopterin oxidoreductase; K00372 nitrate reductase catalytic subunit [EC:1.7.99.4]
Nitrate reductase n=1 Tax=Frankia sp. CN3 RepID=G6H8H0_9ACTO
Molybdopterin oxidoreductase {ECO:0000313|EMBL:CCQ44883.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
SCNpilot_cont_1000_p_scaffold_778_14
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9581..11671)
DNA (2091bp) protein (697aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003783BFC rbh
molybdopterin oxidoreductase rbh
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ADB75664.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_p_scaffold_778_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11719..12270)
DNA (552bp) protein (184aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZP8_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA27724.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_778_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12315..12902
DNA (588bp) protein (196aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZP7_PSEUX
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA27723.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_778_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12782..13384)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNJ2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28290.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_778_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13384..14211)
DNA (828bp) protein (276aa)
9-cis-epoxycarotenoid dioxygenase {ECO:0000313|EMBL:AEA28289.1}; EC=1.13.11.51 {ECO:0000313|EMBL:AEA28289.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
9-cis-epoxycarotenoid dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNJ1_PSEUX
9-cis-epoxycarotenoid dioxygenase; K11159 carotenoid cleavage dioxygenase
SCNpilot_cont_1000_p_scaffold_778_19
unknown

Not on your lists

comp(14243..14491)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_778_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14741..15274
DNA (534bp) protein (178aa)
Transcriptional regulator, PadR-like family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNJ0_PSEUX
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AEA28288.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_778_21
unknown

Not on your lists

15388..15600
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_778_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15561..15761)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU69_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24147.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_778_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15858..16841
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU68_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24146.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_778_24
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17098..17943)
DNA (846bp) protein (282aa)
Putative NagD-like phosphatase n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z2P0_STRSW rbh
NagD-like phosphatase; K02566 NagD protein rbh
Putative NagD-like phosphatase {ECO:0000313|EMBL:CBG72751.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
SCNpilot_cont_1000_p_scaffold_778_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18701..19531)
DNA (831bp) protein (277aa)
DNA-(apurinic or apyrimidinic site) lyase; K05522 endonuclease VIII [EC:3.2.2.- 4.2.99.18] rbh
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:AEA24144.1}; EC=4.2.99.18 {ECO:0000313|EMBL:AEA24144.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
DNA glycosylase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE89 rbh
SCNpilot_cont_1000_p_scaffold_778_26
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19569..20042)
DNA (474bp) protein (158aa)
ribose 5-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
Ribose 5-phosphate isomerase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WQ44_ACTMD
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:ACU35100.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCNpilot_cont_1000_p_scaffold_778_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20142..20726
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU64_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24142.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_778_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20738..21310)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU63_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24141.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_778_29
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21464..22696)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WD83_ACTMD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU37702.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCNpilot_cont_1000_p_scaffold_778_30
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22804..24030)
DNA (1227bp) protein (409aa)
amidohydrolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE269 rbh
Amidohydrolase family protein rbh
Amidohydrolase family protein {ECO:0000313|EMBL:CCH31354.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Displaying items 1-30 of 73 in total

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