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SCNpilot_cont_1000_p_scaffold_927

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_927_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

351..3329
DNA (2979bp) protein (993aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DS
glutamate-ammonia-ligase adenylyltransferase; K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] rbh
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPU9_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_927_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3351..3986
DNA (636bp) protein (212aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPU7_PSEUX
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:AEA26130.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_927_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4078..4764
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0E0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26736.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_927_4
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4816..5241
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TQE1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAP97387.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_927_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5258..5692
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE684
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27622.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_927_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5689..6636
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIV4_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA22933.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_927_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6736..7191)
DNA (456bp) protein (152aa)
molecular chaperone DnaJ n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B010
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH53846.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
SCNpilot_cont_1000_p_scaffold_927_8
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(7202..8104)
DNA (903bp) protein (301aa)
Hydrolase CocE/NonD family protein n=1 Tax=Rhodococcus opacus M213 RepID=K8XBM6_RHOOP
hydrolase CocE/NonD family protein; K06978
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
SCNpilot_cont_1000_p_scaffold_927_9
unknown

Not on your lists

8164..8967
DNA (804bp) protein (268aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_927_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8894..9721)
DNA (828bp) protein (276aa)
Protein FdhD homolog n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX49_PSEUX rbh
protein fdhD; K02379 FdhD protein rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_927_11
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9742..11640)
DNA (1899bp) protein (633aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]; K07219 putative molybdopterin biosynthesis protein rbh
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000379491F rbh
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ADB31202.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_1000_p_scaffold_927_12
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11637..12857)
DNA (1221bp) protein (407aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] rbh
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037DD5F5 rbh
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ADB31201.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_1000_p_scaffold_927_13
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12934..14667)
DNA (1734bp) protein (578aa)
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003772C8E rbh
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit {ECO:0000313|EMBL:ADB31200.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_1000_p_scaffold_927_14
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14664..17573)
DNA (2910bp) protein (970aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] rbh
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036FAB17 rbh
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ADB31199.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_1000_p_scaffold_927_15
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17614..19008)
DNA (1395bp) protein (465aa)
Putative amidase {ECO:0000313|EMBL:KJV03814.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KJV03814.1};; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035E2421 rbh
amidase
SCNpilot_cont_1000_p_scaffold_927_16
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18999..20771)
DNA (1773bp) protein (591aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5); K03738 aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] rbh
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:ADB31198.1}; EC=1.2.7.5 {ECO:0000313|EMBL:ADB31198.1};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036B67DF rbh
SCNpilot_cont_1000_p_scaffold_927_17
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20773..21630)
DNA (858bp) protein (286aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=479435 species="Bacteria
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS73_KRIFD rbh
Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein rbh
SCNpilot_cont_1000_p_scaffold_927_18
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21826..24063)
DNA (2238bp) protein (746aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037716A0 rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
secA2; Protein translocase subunit rbh
SCNpilot_cont_1000_p_scaffold_927_19
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24074..25168)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI0003480EC7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV00281.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
transcriptional regulator CdaR
SCNpilot_cont_1000_p_scaffold_927_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25372..25944
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP58_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23324.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_927_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25932..27872
DNA (1941bp) protein (647aa)
YhgE/Pip C-terminal domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP57_PSEUX rbh
hypothetical protein; K01421 putative membrane protein rbh
YhgE/Pip C-terminal domain protein {ECO:0000313|EMBL:AEA23323.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_927_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27997..28947)
DNA (951bp) protein (317aa)
endonuclease/exonuclease/phosphatase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDBF0
hypothetical protein
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AEA24893.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_927_23
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29418..29675
DNA (258bp) protein (86aa)
Pyridoxamine 5'-phosphate oxidase, FMN-binding {ECO:0000313|EMBL:CCH15544.1}; EC=1.4.3.- {ECO:0000313|EMBL:CCH15544.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI00036B9201
pyridoxamine 5'-phosphate oxidase-related,FMN-binding protein; K07006
SCNpilot_cont_1000_p_scaffold_927_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29669..30673)
DNA (1005bp) protein (335aa)
2OG-Fe(II) oxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQD8_PSEUX rbh
2OG-Fe(II) oxygenase; K06892 rbh
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:AEA28411.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_927_25
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30937..32007
DNA (1071bp) protein (357aa)
membrane protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI00023794E9 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAM03254.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
SCNpilot_cont_1000_p_scaffold_927_26
unknown

Not on your lists

comp(32070..32390)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_927_27
unknown

Not on your lists

32479..32886
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_927_28
unknown

Not on your lists

comp(33282..33389)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 28 items

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