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SCNpilot_cont_1000_p_scaffold_2397

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2397_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2084..2446
DNA (363bp) protein (121aa)
Transcriptional regulator, GntR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH5_PSEUX
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEA26549.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2397_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2489..3067
DNA (579bp) protein (193aa)
NUDIX hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH4_PSEUX rbh
NUDIX hydrolase rbh
NUDIX hydrolase {ECO:0000313|EMBL:AEA26548.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2397_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3053..4177)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH3_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA26547.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2397_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4408..4677
DNA (270bp) protein (90aa)
DNA binding domain protein, excisionase family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH2_PSEUX
excisionase
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:AEA26546.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2397_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4681..4899
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26545.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2397_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4896..5417
DNA (522bp) protein (174aa)
Transcriptional regulator WhiB n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PBM7_9ACTO
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
transcription factor WhiB
SCNpilot_cont_1000_p_scaffold_2397_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5418..5804
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK88_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22311.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2397_8
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5801..6472
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI0003825B96
S.clavuligerus linear plasmid pSCL (complete sequence) {ECO:0000313|EMBL:CAA38045.1}; TaxID=1901 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus.;"
SCNpilot_cont_1000_p_scaffold_2397_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6469..8373
DNA (1905bp) protein (635aa)
Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXG8_PSEUX rbh
type IV secretory pathway VirD4 protein-like protein rbh
Type IV secretory pathway VirD4 protein-like protein {ECO:0000313|EMBL:AEA26542.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2397_10
unknown

Not on your lists

8370..8846
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2397_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8843..9454
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXG7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26541.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2397_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9644..13975
DNA (4332bp) protein (1444aa)
TrwC relaxase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDCCE rbh
TrwC relaxase rbh
TrwC relaxase {ECO:0000313|EMBL:AEA22317.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2397_13
unknown

Not on your lists

comp(14012..14614)
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2397_14
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14919..17828)
DNA (2910bp) protein (970aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B63C45
Uncharacterized protein {ECO:0000313|EMBL:KDN22414.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2397_15
unknown

Not on your lists

comp(18418..18615)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2397_16
unknown

Not on your lists

19866..20009
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2397_17
unknown

Not on your lists

comp(20301..20429)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2397_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20617..21792)
DNA (1176bp) protein (392aa)
Transposase mutator type n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L754_PSEUX
Transposase mutator type {ECO:0000313|EMBL:AEA29027.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
transposase
SCNpilot_cont_1000_p_scaffold_2397_19
unknown

Not on your lists

comp(21857..21925)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 19 items

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