ggKbase home page

SCNpilot_cont_1000_p_scaffold_2813

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2813_1
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91..1290)
DNA (1200bp) protein (400aa)
MFS transporter n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036BB81B rbh
Predicted protein {ECO:0000313|EMBL:EFL07287.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
major facilitator superfamily protein rbh
SCNpilot_cont_1000_p_scaffold_2813_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1287..1916)
DNA (630bp) protein (210aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJY5_PSEUX
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEA27010.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2813_3
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1913..2524)
DNA (612bp) protein (204aa)
undecaprenyl-diphosphatase (EC:3.6.1.27)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037EE995
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AIJ23942.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_1000_p_scaffold_2813_4
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2556..3095)
DNA (540bp) protein (180aa)
ChrB domain-containing protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AD00
PaaX-like protein
PaaX-like protein {ECO:0000313|EMBL:AFM17022.1}; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
SCNpilot_cont_1000_p_scaffold_2813_5
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3827..4222
DNA (396bp) protein (132aa)
family 2 glycosyl transferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE02B
Uncharacterized protein {ECO:0000313|EMBL:EGW50582.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
glycosyl transferase family 2
SCNpilot_cont_1000_p_scaffold_2813_6
unknown

Not on your lists

comp(4504..4770)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2813_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4835..5143)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003792291
phospholipase/carboxylesterase
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ADB39724.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_1000_p_scaffold_2813_8

Not on your lists

comp(5140..5613)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=uncultured microorganism RepID=E0X6Q6_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ACY25461.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2813_9
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5672..6355
DNA (684bp) protein (228aa)
TetR family transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B394B3
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KCB36429.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
SCNpilot_cont_1000_p_scaffold_2813_10
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6482..7327)
DNA (846bp) protein (282aa)
XRE family transcriptional regulator n=1 Tax=Frankia sp. BCU110501 RepID=UPI000376F87F rbh
helix-turn-helix domain-containing protein rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABW13178.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_1000_p_scaffold_2813_11
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7428..8555
DNA (1128bp) protein (376aa)
aldo/keto reductase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B41692 rbh
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABW13177.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_1000_p_scaffold_2813_12
unknown

Not on your lists

8771..9703
DNA (933bp) protein (311aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2813_13
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9806..10210
DNA (405bp) protein (135aa)
Low temperature requirement A n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NMR8_9ACTO
low temperature requirement A
Low temperature requirement A {ECO:0000313|EMBL:AEN13438.1}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;"
SCNpilot_cont_1000_p_scaffold_2813_14
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10218..11126
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B3B046
Predicted protein {ECO:0000313|EMBL:EFL07950.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_2813_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11132..11719)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF49_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98090.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative O-methyltransferase
SCNpilot_cont_1000_p_scaffold_2813_16
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11716..12753)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=22 Tax=Mycobacterium abscessus RepID=B1MG33_MYCA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIC61638.1}; TaxID=1158135 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus M94.;"
Displaying 16 items

View Taxonomy