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SCNpilot_cont_1000_p_scaffold_2911

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2911_1
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..348
DNA (348bp) protein (116aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9UVI8_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL06204.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
XRE family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_2911_2
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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345..914
DNA (570bp) protein (190aa)
Flavoprotein n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W782_9ACTO
Flavoprotein {ECO:0000313|EMBL:EFL26693.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
flavoprotein
SCNpilot_cont_1000_p_scaffold_2911_3
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1040..1357
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WWM1_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR50577.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
pra; regulatory protein
SCNpilot_cont_1000_p_scaffold_2911_4
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1357..2007
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WWL9_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR50575.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2911_5
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2000..2791
DNA (792bp) protein (264aa)
cell division protein FtsK n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE6BC rbh
DNA segregation ATPase, FtsK/SpoIIIE family {ECO:0000313|EMBL:EHR50574.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family rbh
SCNpilot_cont_1000_p_scaffold_2911_6
unknown

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2788..3069
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2911_7
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3066..3401
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00037DD67F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL48862.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_cont_1000_p_scaffold_2911_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3398..4933
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF57 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA27368.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2911_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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4945..5133
DNA (189bp) protein (63aa)
transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF56
excisionase family DNA binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ACV76894.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_p_scaffold_2911_10
Streptomyces cyaneogriseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5133..6368
DNA (1236bp) protein (412aa)
integrase n=1 Tax=Streptomyces sp. AA0539 RepID=UPI00030DC521 rbh
Streptomyces cyaneogriseus subsp. noncyanogenus strain NMWT 1, complete genome {ECO:0000313|EMBL:AJP03003.1}; TaxID=477245 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cyaneogriseus subsp. noncyanogenus.;"
phage integrase rbh
SCNpilot_cont_1000_p_scaffold_2911_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6608..7555
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKE0_PSEUX rbh
hypothetical protein; K07054 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA22487.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2911_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7547..8182)
DNA (636bp) protein (212aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD9_PSEUX
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA22486.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2911_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8236..9222
DNA (987bp) protein (329aa)
NAD(P)H quinone oxidoreductase, PIG3 family {ECO:0000313|EMBL:AEA22485.1}; EC=1.6.5.5 {ECO:0000313|EMBL:AEA22485.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
NAD(P)H quinone oxidoreductase, PIG3 family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD8_PSEUX rbh
NAD(P)H quinone oxidoreductase rbh
SCNpilot_cont_1000_p_scaffold_2911_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9350..9889
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22484.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2911_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9959..10822
DNA (864bp) protein (288aa)
ABC-2 type transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD6_PSEUX rbh
ABC transporter; K09690 lipopolysaccharide transport system permease protein rbh
ABC-2 type transporter {ECO:0000313|EMBL:AEA22483.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_2911_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10850..11614
DNA (765bp) protein (255aa)
Teichoic-acid-transporting ATPase {ECO:0000313|EMBL:AEA22482.1}; EC=3.6.3.40 {ECO:0000313|EMBL:AEA22482.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Teichoic-acid-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD5_PSEUX rbh
teichoic-acid-transporting AtPase; K09691 lipopolysaccharide transport system ATP-binding protein rbh
SCNpilot_cont_1000_p_scaffold_2911_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11611..12534
DNA (924bp) protein (308aa)
Glycosyl transferase family 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD4_PSEUX rbh
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEA22481.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying 17 items

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