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SCNpilot_cont_1000_p_scaffold_3045

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3045_1
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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91..840
DNA (750bp) protein (250aa)
Putative oxidoreductase, Zn-dependent and NAD(P)-binding n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F581_MODMB
oxidoreductase, Zn-dependent and NAD(P)-binding
Putative oxidoreductase, Zn-dependent and NAD(P)-binding {ECO:0000313|EMBL:CCH90794.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCNpilot_cont_1000_p_scaffold_3045_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(967..1971)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000369134E rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AIJ22413.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
acyl-CoA dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_3045_3
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2072..3748)
DNA (1677bp) protein (559aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] rbh
AMP-dependent synthetase and ligase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A9C5_THECD rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:KEI45885.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
SCNpilot_cont_1000_p_scaffold_3045_4
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3745..4713)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=2 Tax=Rhodococcus pyridinivorans AK37 RepID=H0JR73_9NOCA rbh
Metal-dependent hydrolase {ECO:0000313|EMBL:AHD19877.1}; TaxID=1435356 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3045_5
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4847..5704
DNA (858bp) protein (286aa)
UPI0003D6D74C related cluster n=1 Tax=unknown RepID=UPI0003D6D74C rbh
Uncharacterized protein {ECO:0000313|EMBL:KEI45883.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
transcriptional regulator
SCNpilot_cont_1000_p_scaffold_3045_6
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5795..5971)
DNA (177bp) protein (59aa)
acyl-CoA synthetase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Acyl-CoA synthetase n=1 Tax=Rhodococcus opacus M213 RepID=K8XV27_RHOOP
Acyl-CoA synthetase {ECO:0000313|EMBL:ELB86041.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
SCNpilot_cont_1000_p_scaffold_3045_7
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5968..7323)
DNA (1356bp) protein (452aa)
acyl-CoA synthetase (EC:6.2.1.-) rbh
Putative fatty-acid--CoA ligase {ECO:0000313|EMBL:BAH30951.1}; EC=6.2.1.- {ECO:0000313|EMBL:BAH30951.1};; TaxID=234621 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (strain PR4 / NBRC 100887).;"
Putative fatty-acid--CoA ligase n=1 Tax=Rhodococcus erythropolis (strain PR4 / NBRC 100887) RepID=C0ZLX4_RHOE4 rbh
SCNpilot_cont_1000_p_scaffold_3045_8
Rhodococcus sp. P27, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7320..8573)
DNA (1254bp) protein (418aa)
acetyl-CoA acyltransferase (EC:2.3.1.-) rbh
lipid-transfer protein n=1 Tax=Rhodococcus erythropolis RepID=UPI0002FE28EB rbh
Thiolase {ECO:0000313|EMBL:ERB55653.1}; TaxID=1384060 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. P27.;"
SCNpilot_cont_1000_p_scaffold_3045_9
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8570..9505)
DNA (936bp) protein (312aa)
Uncharacterized protein n=2 Tax=Rhodococcus RepID=C0ZLX2_RHOE4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDQ04403.1}; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3045_10
Rhodococcus sp. P27, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9521..10312)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Rhodococcus erythropolis RepID=UPI000315004F rbh
Uncharacterized protein {ECO:0000313|EMBL:ERB55651.1}; TaxID=1384060 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. P27.;"
polyketide cyclase rbh
SCNpilot_cont_1000_p_scaffold_3045_11
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10410..11009)
DNA (600bp) protein (200aa)
Putative TetR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis (strain PR4 / NBRC 100887) RepID=C0ZLX0_RHOE4
TetR family transcriptional regulator
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:BAH30947.1}; TaxID=234621 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (strain PR4 / NBRC 100887).;"
SCNpilot_cont_1000_p_scaffold_3045_12
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11184..11651)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003757111
sdh; short-chain dehydrogenase/reductase
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:AGM06419.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
Displaying 12 items

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