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SCNpilot_cont_1000_p_scaffold_1076

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1076_1
unknown

Not on your lists

comp(40..201)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1076_2
unknown

Not on your lists

comp(257..460)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1076_3
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(588..1034)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036EA12B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB08519.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCNpilot_cont_1000_p_scaffold_1076_4
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1668..2261)
DNA (594bp) protein (198aa)
Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1) n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WNY9_9ACTO
Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1) {ECO:0000313|EMBL:EFL27962.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1076_5
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2258..2551)
DNA (294bp) protein (98aa)
metal-binding protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379DE9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ31626.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
SCNpilot_cont_1000_p_scaffold_1076_6
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2551..3288)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0V7J6_MYCFO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDO31417.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;"
hypothetical protein; K09990 hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1076_7
Mycobacterium fortuitum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3285..3899)
DNA (615bp) protein (205aa)
methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63); K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00036F85D3
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:EJZ14952.1}; TaxID=1214102 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium fortuitum subsp. fortuitum DSM 46621.;"
SCNpilot_cont_1000_p_scaffold_1076_8
Mycobacterium colombiense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3896..4393)
DNA (498bp) protein (166aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4JUY3_9MYCO
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EJO88087.1}; TaxID=1041522 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium colombiense CECT 3035.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_cont_1000_p_scaffold_1076_9
unknown

Not on your lists

comp(4498..4725)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1076_10
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4722..5303)
DNA (582bp) protein (194aa)
ogt; methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63); K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WCR8_9MICO
Methylated-DNA-protein-cysteine methyltransferase Ogt {ECO:0000313|EMBL:CDO24270.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
SCNpilot_cont_1000_p_scaffold_1076_11
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5889..6197
DNA (309bp) protein (103aa)
Transposase IS3/IS911 family protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A4E8_CELGA
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:AEI12054.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1076_12
Rhodococcus sp. NS1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6399..7472
DNA (1074bp) protein (358aa)
hypothetical protein, partial n=1 Tax=Sciscionella marina RepID=UPI00037D1274 rbh
transposase is116/is110/is902 family protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIU93802.1}; TaxID=402236 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NS1.;"
SCNpilot_cont_1000_p_scaffold_1076_13
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7571..8437
DNA (867bp) protein (289aa)
Integrase catalytic region n=1 Tax=Frankia sp. CN3 RepID=G6H346_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:AHI00342.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
Integrase catalytic region rbh
SCNpilot_cont_1000_p_scaffold_1076_14
unknown

Not on your lists

comp(8547..8891)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1076_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9364..12045)
DNA (2682bp) protein (894aa)
Adenylate/guanylate cyclase id=3293340 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
LuxR family transcriptional regulator
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_cont_1000_p_scaffold_1076_16
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12393..13544
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4Y2T1_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ28925.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1076_17
unknown

Not on your lists

13892..14740
DNA (849bp) protein (283aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1076_18
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14797..17856)
DNA (3060bp) protein (1020aa)
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RWI9_MYCRN rbh
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; K06147 ATP-binding cassette, subfamily B, bacterial rbh
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain {ECO:0000313|EMBL:AEV73121.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
SCNpilot_cont_1000_p_scaffold_1076_19
unknown

Not on your lists

comp(17837..18853)
DNA (1017bp) protein (339aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1076_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18853..19527)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F839_CONWI
hypothetical protein; K06927
Uncharacterized protein {ECO:0000313|EMBL:ADB52933.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_1000_p_scaffold_1076_21
unknown

Not on your lists

comp(19529..19675)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1076_22
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19960..21672)
DNA (1713bp) protein (571aa)
Multidrug resistance protein B n=1 Tax=Mycobacterium marinum str. Europe RepID=S7QXW4_MYCMR rbh
Transmembrane transport protein {ECO:0000313|EMBL:CDO88617.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
transmembrane transport protein rbh
SCNpilot_cont_1000_p_scaffold_1076_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(21812..22309)
DNA (498bp) protein (166aa)
Curculin domain protein (Mannose-binding) lectin n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RL0_SOLUE
curculin domain-containing protein
Curculin domain protein (Mannose-binding) lectin {ECO:0000313|EMBL:ABJ87710.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_1000_p_scaffold_1076_24
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22985..24679
DNA (1695bp) protein (565aa)
histidine kinase n=1 Tax=Glaciibacter superstes RepID=UPI0003B63DFA
Putative signal transduction histidine kinase {ECO:0000313|EMBL:CCH77366.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
putative signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_1076_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24697..25317
DNA (621bp) protein (207aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7F1_CONWI
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB50813.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_1000_p_scaffold_1076_26
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25441..26856)
DNA (1416bp) protein (472aa)
Ig domain protein group 1 domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F882_CONWI
NHL repeat containing protein (Modular protein) {ECO:0000313|EMBL:CCH77436.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
Ig domain-containing protein group 1 domain-containing protein
SCNpilot_cont_1000_p_scaffold_1076_27
Mycobacterium indicus pranii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27258..27599)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003737DE8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS14846.1}; TaxID=1232724 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium indicus pranii MTCC 9506.;"
SCNpilot_cont_1000_p_scaffold_1076_28
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27817..28221
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00035F7514
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AIJ21238.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
MarR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1076_29

Not on your lists

28600..28908
DNA (309bp) protein (103aa)
Veg23 n=1 Tax=uncultured soil bacterium RepID=B7T195_9BACT
Veg23 {ECO:0000313|EMBL:ACJ60965.1}; TaxID=164851 species="Bacteria; environmental samples.;" source="uncultured soil bacterium.;"
Mini-circle putative transposase for IS117
Displaying 29 items

View Taxonomy