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SCNpilot_cont_1000_p_scaffold_1086

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1086_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1086_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

156..908
DNA (753bp) protein (251aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU6_PSEUX rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEA22905.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1086_3
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(925..1203)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VMJ2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB97433.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
SCNpilot_cont_1000_p_scaffold_1086_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1289..1702)
DNA (414bp) protein (138aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Thioesterase superfamily protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU8_PSEUX
Thioesterase superfamily protein {ECO:0000313|EMBL:AEA22907.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1086_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1699..2025)
DNA (327bp) protein (109aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU9_PSEUX
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AEA22908.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1086_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2043..2792)
DNA (750bp) protein (250aa)
MerR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE2A rbh
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AEA22910.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1086_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2878..4098
DNA (1221bp) protein (407aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEA22911.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AEA22911.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
acetyl-CoA acetyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE29 rbh
SCNpilot_cont_1000_p_scaffold_1086_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4100..6301
DNA (2202bp) protein (734aa)
3-hydroxybutyryl-CoA epimerase; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] rbh
3-hydroxybutyryl-CoA epimerase {ECO:0000313|EMBL:AEA22912.1}; EC=5.1.2.3 {ECO:0000313|EMBL:AEA22912.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
3-hydroxybutyryl-CoA epimerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTV3_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_1086_9
unknown

Not on your lists

comp(6369..7136)
DNA (768bp) protein (256aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1086_10
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7191..7886)
DNA (696bp) protein (232aa)
GDSL-like protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SF75_9ACTO
GDSL-like protein {ECO:0000313|EMBL:EFQ82160.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
SCNpilot_cont_1000_p_scaffold_1086_11
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7883..8242)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J0R3_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EXU91627.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1086_12
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8283..8894
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H5Q9_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL88346.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_cont_1000_p_scaffold_1086_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8991..9803
DNA (813bp) protein (271aa)
ANTAR domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTV5_PSEUX
ANTAR domain-containing protein
ANTAR domain protein {ECO:0000313|EMBL:AEA22914.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1086_14
Synechococcus sp. RS9917, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9884..10318
DNA (435bp) protein (145aa)
Two component transcriptional regulator, winged helix family protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z7W9_9SYNE
Two component transcriptional regulator, winged helix family protein {ECO:0000313|EMBL:EAQ68899.1}; TaxID=221360 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. RS9917.;"
response regulator receiver; K07669 two-component system, OmpR family, response regulator MprA
SCNpilot_cont_1000_p_scaffold_1086_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10315..10611
DNA (297bp) protein (99aa)
stress protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE27
stress responsive alpha-beta barrel domain-containing protein
Stress responsive alpha-beta barrel domain-containing protein {ECO:0000313|EMBL:AEA22916.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1086_16
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10901..11872)
DNA (972bp) protein (324aa)
Transcriptional regulator, LysR family n=2 Tax=Saccharopolyspora erythraea RepID=A4F7Y9_SACEN
Transcriptional regulator {ECO:0000313|EMBL:AHY46343.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1086_17
unknown

Not on your lists

comp(11863..12348)
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1086_18
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12510..12965
DNA (456bp) protein (152aa)
Maleylacetate reductase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LL10_9ACTO
maleylacetate reductase
Maleylacetate reductase {ECO:0000313|EMBL:AGL19128.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_1000_p_scaffold_1086_19
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12958..13815
DNA (858bp) protein (286aa)
intradiol ring-cleavage dioxygenase; K04098 hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] rbh
Intradiol ring-cleavage dioxygenase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJW6_CATAD rbh
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:ACU73204.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_cont_1000_p_scaffold_1086_20
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13812..15554
DNA (1743bp) protein (581aa)
monooxygenase FAD-binding; K10676 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20] rbh
Monooxygenase FAD-binding protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V529_9MICC rbh
Phenol 2-monooxygenase {ECO:0000313|EMBL:KEI45382.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
SCNpilot_cont_1000_p_scaffold_1086_21
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15622..16701)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6H5S3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ42814.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_1000_p_scaffold_1086_22
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17087..17365
DNA (279bp) protein (93aa)
PilT protein domain protein n=1 Tax=Streptomyces sp. W007 RepID=H0BDL4_9ACTO
Twitching motility protein PilT {ECO:0000313|EMBL:KJY34430.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
SCNpilot_cont_1000_p_scaffold_1086_23
unknown

Not on your lists

comp(17304..17570)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1086_24
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18077..18661)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00036EC56D
Uncharacterized protein {ECO:0000313|EMBL:KEG43878.1}; Flags: Fragment;; TaxID=66897 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;"
stress protein
SCNpilot_cont_1000_p_scaffold_1086_25
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18786..19751
DNA (966bp) protein (322aa)
L-asparaginase II n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1R7_CELFA rbh
L-asparaginase II rbh
L-asparaginase II {ECO:0000313|EMBL:AEE47487.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1086_26
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19914..20867
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF62
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN02322.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
SCNpilot_cont_1000_p_scaffold_1086_27
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20884..21444)
DNA (561bp) protein (187aa)
RNA polymerase sigma factor SigC n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003684697
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EWM63832.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_p_scaffold_1086_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21492..22190
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1Q7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27967.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1086_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22190..22738
DNA (549bp) protein (183aa)
DoxX family protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YA28_THEBD
Putative membrane protein {ECO:0000313|EMBL:EXG80144.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
DoxX family protein
SCNpilot_cont_1000_p_scaffold_1086_30
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22738..23421
DNA (684bp) protein (228aa)
DSBA oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE9B
Protein-disulfide isomerase {ECO:0000313|EMBL:EXG80143.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
DSBA oxidoreductase
Displaying items 1-30 of 37 in total

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