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SCNpilot_cont_1000_p_scaffold_1944

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1944_1
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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221..1282
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4ST96_AMYOR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGM06624.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
SCNpilot_cont_1000_p_scaffold_1944_2
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1368..2051
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI000369A25F rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFZ81562.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
ABC-type transporter, ATPase subunit rbh
SCNpilot_cont_1000_p_scaffold_1944_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2114..4594)
DNA (2481bp) protein (827aa)
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEA27802.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AEA27802.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0K3_PSEUX
carbon-monoxide dehydrogenase
SCNpilot_cont_1000_p_scaffold_1944_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(4591..5304)
DNA (714bp) protein (238aa)
Band 7 protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFH2_NAKMY
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:ACV79949.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_p_scaffold_1944_5
unknown

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comp(5699..6034)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1944_6
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6024..6458)
DNA (435bp) protein (145aa)
UspA domain-containing protein n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2Y293_9NOCA
UspA domain-containing protein {ECO:0000313|EMBL:EME67206.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
Universal stress protein family
SCNpilot_cont_1000_p_scaffold_1944_7
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6993..7367
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI00037A6329
Uroporphyrin-III c-methyltransferase {ECO:0000313|EMBL:EWM19167.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1944_8
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7467..8705)
DNA (1239bp) protein (413aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3] rbh
Putative ferredoxin reductase n=1 Tax=Streptomyces peucetius RepID=Q700Z1_STRPE rbh
Reductase {ECO:0000313|EMBL:EWM19169.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_1000_p_scaffold_1944_9
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8711..9823)
DNA (1113bp) protein (371aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] rbh
Transaldolase n=1 Tax=Streptomyces afghaniensis 772 RepID=S4N9H7_9ACTO rbh
SCNpilot_cont_1000_p_scaffold_1944_10
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9867..11132)
DNA (1266bp) protein (422aa)
Dihydrolipoyllysine-residue acetyltransferase {ECO:0000313|EMBL:AIX99936.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AIX99936.1};; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] rbh
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XNN7_9PSEU rbh
SCNpilot_cont_1000_p_scaffold_1944_11
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11143..12135)
DNA (993bp) protein (331aa)
transketolase, central region; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] rbh
pyruvate dehydrogenase subunit beta n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037ACE9D rbh
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:EWM19173.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_1000_p_scaffold_1944_12
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12132..13202)
DNA (1071bp) protein (357aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
pyruvate dehydrogenase (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] rbh
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000381CA6D rbh
SCNpilot_cont_1000_p_scaffold_1944_13
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13213..13680)
DNA (468bp) protein (156aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSF4_ACIC1
CBS domain-containing protein {ECO:0000313|EMBL:EWM19175.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
signal-transduction protein
SCNpilot_cont_1000_p_scaffold_1944_14
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13803..16757)
DNA (2955bp) protein (985aa)
Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYU7_PSEUX rbh
LigA protein {ECO:0000313|EMBL:EWM19178.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
winged helix family transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_1944_15
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17034..17864
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LW28_ACIC1 rbh
Integral membrane protein {ECO:0000313|EMBL:EWM19179.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1944_16
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17887..18654
DNA (768bp) protein (256aa)
fumarate reductase iron-sulfur subunit (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase subunit B n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LW26_ACIC1 rbh
Succinate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:EWM19180.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_1000_p_scaffold_1944_17
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18651..21434
DNA (2784bp) protein (928aa)
aconitase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] rbh
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00035FF980 rbh
Aconitate hydratase 1 {ECO:0000313|EMBL:EWM19181.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_1000_p_scaffold_1944_18
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22338..23669)
DNA (1332bp) protein (444aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] rbh
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037069D1 rbh
NADH dehydrogenase {ECO:0000313|EMBL:EWM19192.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_1000_p_scaffold_1944_19
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(23713..24303)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000369AFF1
Uncharacterized protein {ECO:0000313|EMBL:EYR65269.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
Displaying 19 items

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