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SCNpilot_cont_1000_p_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 203 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_108_1
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(93..485)
DNA (393bp) protein (131aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Caulobacter sp. AP07 RepID=J2Q3G0_9CAUL
hypothetical protein
Tax=RBG_13_Bacteroidetes_42_15_curated
SCNpilot_cont_1000_p_scaffold_108_2
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(708..968)
DNA (261bp) protein (87aa)
Band 7 protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IES1_BEII9
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:ACB97011.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_1000_p_scaffold_108_3
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1065..2279
DNA (1215bp) protein (405aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EP69_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30904.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_cont_1000_p_scaffold_108_4
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2254..3141)
DNA (888bp) protein (296aa)
Ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EPT4_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30718.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_cont_1000_p_scaffold_108_5
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3138..4649)
DNA (1512bp) protein (504aa)
putative thymidine phosphorylase (TdRPase) (EC:2.4.2.4) rbh
Putative thymidine phosphorylase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EQL4_9GAMM rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_13_curated
SCNpilot_cont_1000_p_scaffold_108_6
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4646..6004)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EPT2_9GAMM rbh
Metallo-beta-lactamase family protein, RNA-specific rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_13_curated
SCNpilot_cont_1000_p_scaffold_108_7
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6103..6348)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Legionella longbeachae RepID=D3HM04_LEGLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBJ13488.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_108_8
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6531..8906
DNA (2376bp) protein (792aa)
plasma-membrane proton-efflux P-type ATPase (EC:3.6.3.6); K01535 H+-transporting ATPase [EC:3.6.3.6]
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EP68_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30903.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_cont_1000_p_scaffold_108_9
RHI_Legionellales_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8935..9336
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25015 RepID=C6YUN0_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Legionellales_37_14_curated
SCNpilot_cont_1000_p_scaffold_108_10
unknown

Not on your lists

9440..9622
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_108_11
GWE2_Gammaproteobacteria_37_16_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9731..12100
DNA (2370bp) protein (790aa)
phosphoketolase (EC:4.1.2.9); K01621 phosphoketolase [EC:4.1.2.9] rbh
Probable phosphoketolase id=1774525 bin=GWE2_Gammaproteobacteria_37_16 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small rbh
Tax=GWE2_Gammaproteobacteria_37_16_curated
SCNpilot_cont_1000_p_scaffold_108_12
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12079..12330
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7HS05_LEGPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD06779.1}; TaxID=91891 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila subsp. pneumophila.;"
SCNpilot_cont_1000_p_scaffold_108_13
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13320..13526
DNA (207bp) protein (69aa)
Antirestriction protein n=1 Tax=Legionella pneumophila (strain Corby) RepID=A5IFT4_LEGPC
antirestriction protein
Antirestriction protein {ECO:0000313|EMBL:CCD06784.1}; TaxID=91891 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila subsp. pneumophila.;"
SCNpilot_cont_1000_p_scaffold_108_14
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13618..15783
DNA (2166bp) protein (722aa)
Catalase-peroxidase 1 {ECO:0000255|HAMAP-Rule:MF_01961}; Short=CP 1 {ECO:0000255|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000255|HAMAP-Rule:MF_01961};; Peroxidase/catalase 1 {ECO:0000255|HAMAP-Rule:MF_01961}; TaxID=297245 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila (strain Lens).;"
katB; catalase-peroxidase KatB; K03782 catalase-peroxidase [EC:1.11.1.21] rbh
catalase-peroxidase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C8081 rbh
SCNpilot_cont_1000_p_scaffold_108_15
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15859..16323
DNA (465bp) protein (155aa)
Thioredoxin {ECO:0000313|EMBL:ETO93654.1}; EC=1.8.1.8 {ECO:0000313|EMBL:ETO93654.1};; TaxID=1274403 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis RV-2-2007.;"
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8]
thioredoxin n=1 Tax=Legionella tunisiensis RepID=UPI0003753E95
SCNpilot_cont_1000_p_scaffold_108_16
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16754..18013
DNA (1260bp) protein (420aa)
Na+/H+ antiporter n=2 Tax=Legionella longbeachae RepID=D1REC0_LEGLO rbh
sodium/hydrogen exchanger; K03316 monovalent cation:H+ antiporter, CPA1 family rbh
Putative sodium/hydrogen exchanger {ECO:0000313|EMBL:CBJ13650.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_108_17
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18070..18552)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMM9_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31423.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
transcriptional regulator, MarR family
SCNpilot_cont_1000_p_scaffold_108_18
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18786..20006
DNA (1221bp) protein (407aa)
glutamate-cysteine ligase (EC:6.3.-.-); K06048 carboxylate-amine ligase [EC:6.3.-.-] rbh
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
Carboxylate-amine ligase LLO_3209 n=2 Tax=Legionella longbeachae RepID=D3HMH6_LEGLN rbh
SCNpilot_cont_1000_p_scaffold_108_19
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20046..20738
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Legionella longbeachae RepID=D3HMH7_LEGLN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBJ13666.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_108_20
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20753..22537
DNA (1785bp) protein (595aa)
Putative asparagine synthase, glutamine-hydrolyzing protein {ECO:0000313|EMBL:CBJ12256.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CBJ12256.1};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] rbh
Asparagine synthetase n=2 Tax=Legionella longbeachae RepID=D3HTL4_LEGLN rbh
SCNpilot_cont_1000_p_scaffold_108_21
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22578..23009
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Legionella longbeachae serogroup 1 (strain NSW150) RepID=D3HTL3_LEGLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBJ12255.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_108_22
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23105..24394)
DNA (1290bp) protein (430aa)
Putative voltage-gated chloride channel protein (ClC-type) n=1 Tax=Legionella longbeachae serogroup 1 (strain NSW150) RepID=D3HTM2_LEGLN rbh
clcA; voltage-gated chloride channel protein (ClC-type); K03281 chloride channel protein, CIC family rbh
Putative voltage-gated chloride channel protein (ClC-type) {ECO:0000313|EMBL:CBJ12264.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_108_23
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24467..26002)
DNA (1536bp) protein (512aa)
treF; alpha,alpha-trehalase (EC:3.2.1.28); K01194 alpha,alpha-trehalase [EC:3.2.1.28] rbh
Alpha,alpha-trehalase {ECO:0000313|EMBL:CBJ13904.1}; EC=3.2.1.28 {ECO:0000313|EMBL:CBJ13904.1};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
Periplasmic trehalase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD72_LEGLO rbh
SCNpilot_cont_1000_p_scaffold_108_24
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26262..26522)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031B6F57
Membrane protein {ECO:0000313|EMBL:AKH38661.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
membrane protein
SCNpilot_cont_1000_p_scaffold_108_25
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26519..26779)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000374B3C1
Membrane protein {ECO:0000313|EMBL:AKH38660.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_108_26
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26782..27171)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y6B9_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92805.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_cont_1000_p_scaffold_108_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27489..29093)
DNA (1605bp) protein (535aa)
ferredoxin-dependent glutamate synthase (EC:1.4.7.1)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346D10C rbh
Glutamate synthase {ECO:0000313|EMBL:KGI78227.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_cont_1000_p_scaffold_108_28
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29111..29965)
DNA (855bp) protein (285aa)
Glutamine amidotransferase n=6 Tax=Legionella pneumophila RepID=I7HYQ3_LEGPN rbh
Putative glutamine amidotransferase {ECO:0000313|EMBL:AHE65930.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis ATCC 33761 = DSM 21215.;"
glutamine amidotransferase; K07008 glutamine amidotransferase rbh
SCNpilot_cont_1000_p_scaffold_108_29
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

30319..32256
DNA (1938bp) protein (646aa)
Kef-type K+ transport system, membrane component id=2175662 bin=GWB2_Chloroflexi_54_36 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81 rbh
transporter, CPA2 family rbh
Tax=GWB2_Chloroflexi_54_36_curated
SCNpilot_cont_1000_p_scaffold_108_30
unknown

Not on your lists

32483..32686
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying items 1-30 of 203 in total

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